Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ephemera_20danica_20[genbank_20GCA_5F000507165.1_202013-12-12] 9,036 sequences; 475,911,277 total letters Query= NC_031245.1 Length=221908 Score E Sequences producing significant alignments: (Bits) Value seq406 91.5 2e-13 >seq406 Length=46826 Score = 91.5 bits (100), Expect = 2e-13 Identities = 111/147 (76%), Gaps = 11/147 (7%) Strand=Plus/Minus Query 26290 AATTGCTGGGACATCCTGAGAGCCAGTCAGACTACAACGTAAGGATGAAATAAGCCTAAG 26349 ||||||||||||| ||| | ||| | || | |||||| |||||||||| |||||||| Sbjct 5745 AATTGCTGGGACACCCTAA-AGCTATGCAC-CAACAACGCAAGGATGAAACAAGCCTAAA 5688 Query 26350 CGTGAATGTTTGAAAACTGACTGGAT-------TGGATAATCAGCATCCAAGCTCCGAAT 26402 |||||||| ||||||| || | ||| ||| |||||||| ||||| |||| Sbjct 5687 CGTGAATGGTTGAAAA-TGTATAGATGACACAATGGGCAATCAGCAGCCAAGAGGCGAAC 5629 Query 26403 AGGAGAAGGTCCAACGACTATC-GAAA 26428 || ||||| ||||||||||| |||| Sbjct 5628 AGCCTAAGGTTCAACGACTATCTGAAA 5602 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 709897408030080