Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ephemera_20danica_20[genbank_20GCA_5F000507165.1_202013-12-12] 9,036 sequences; 475,911,277 total letters Query= NC_031251.1 Length=47880 Score E Sequences producing significant alignments: (Bits) Value seq2001 86.0 2e-12 >seq2001 Length=3286380 Score = 86.0 bits (94), Expect = 2e-12 Identities = 232/350 (66%), Gaps = 35/350 (10%) Strand=Plus/Plus Query 3370 TGTTCATCTACGACGTCATCGACGACTGGTTCGGCGTCTCGGCCGAGATGTTCGCCCGCG 3429 || ||||||| ||| ||||| | ||| |||||| |||||| |||||| | Sbjct 2391936 TGCTCATCTATGACTACATCGGC---TGGGGTGGCGTCACGGCCGCCGACTTCGCCAAAG 2391992 Query 3430 AGCTGTCCGGAATCGATGCCGAAGA-GATCACGGTCCGGATCAACAGCCCGGGCGGCAAC 3488 |||| | ||| || ||||| |||||| ||||||||||| | |||||||| || Sbjct 2391993 AGCTACGGGCGATCACCGC-GAAGACGATCACCGTCCGGATCAATACGCCGGGCGGAGAC 2392051 Query 3489 GTGTTCGACGGGATCGCGATCCTCAACGCGCTACGCGGTCACAAGGCCCACGTCACCACC 3548 || |||||||| |||| || |||| || ||| || | |||| | ||||| Sbjct 2392052 GTATTCGACGGCCTCGCCATTTTCAA-----TA----GTCTGAAAGATCACGGCGCCACC 2392102 Query 3549 ATC---------GTCGACGGCCTCGCAGCGTCAGCAGCG--AGCTTCATCGCGATGGCCG 3597 ||| |||||||| | || || ||||| || ||| | || |||||||||| Sbjct 2392103 ATCAACGTGAAGATCGACGGCATTGC--CGCCAGCATCGGCAGCATTATTGCGATGGCCG 2392160 Query 3598 GCGACGAGATCGTGA----TGAATCGCAACGCGGAGATGATGATTCACGACGCCTCCGGT 3653 || || |||| || ||| ||| || ||||||||||| || ||| | Sbjct 2392161 GCCACACGATCACGATGGGTGAGTCG----GCCTTCCTGATGATTCACAACCCCTGGGCC 2392216 Query 3654 GTGTGCATCGGCAACGCCAAGGACATGGCCGAGATGCACGACATGCTCGA 3703 || ||||||||||||| ||| ||| ||||||| |||| ||||| Sbjct 2392217 ATGGCCATCGGCAACGCCGCGGATATGCGCGAGATGGCTGACACCCTCGA 2392266 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 153077972588144