Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ephemera_20danica_20[genbank_20GCA_5F000507165.1_202013-12-12] 9,036 sequences; 475,911,277 total letters Query= NC_031935.1 Length=186386 Score E Sequences producing significant alignments: (Bits) Value seq6036 731 0.0 >seq6036 Length=8020 Score = 731 bits (810), Expect = 0.0 Identities = 791/1040 (76%), Gaps = 10/1040 (1%) Strand=Plus/Plus Query 177589 TGGGAACAATTCTGTAACTGGGTAACCTCCACCAACAATCGTCTGTATGTCGGTTGGTTC 177648 ||||||| |||||| ||| | || || | || ||| | || |||||||||| Sbjct 33 TGGGAACGTTTCTGTGGTTGGATTACTAGTACTGAAAACCGTTTATACATCGGTTGGTTT 92 Query 177649 GGTGTCCTGATGATCCCTACGCTGCTCGCTGCTGCTATCTGTTTCATCGTCGCTTTCGTC 177708 ||| | ||| ||||||| | | | || || |||| |||| |||| ||| || Sbjct 93 GGTTGTTTAATGTTCCCTACATTATTAACAGCAACTTCTTGTTACATCATCGCATTCATC 152 Query 177709 GCTGCTCCTCCTGTGGACATCGACGGCATCCGTGAACCCGTCGCTGGTTCCCTGATGTAT 177768 || |||||||| || || ||||| || |||||||| || || || ||||| | | || Sbjct 153 GCAGCTCCTCCAGTTGATATCGATGGTATCCGTGAGCCAGTAGCAGGTTCATTATTATAC 212 Query 177769 GGCAACAACATCATTTCTGGTGCTGTTGTTCCTTCTTCTAACGCTATTGGTCTCCACTTC 177828 || ||||||||||| |||||||| ||| | ||| |||||||||||| ||| | |||||| Sbjct 213 GGTAACAACATCATCTCTGGTGCAGTTATCCCTAGTTCTAACGCTATCGGTATGCACTTC 272 Query 177829 TATCCCATCTGGGAAGCAGCTTCTCTCGATGAGTGGCTCTACAATGGTGGTCCTTTCCAA 177888 || || || |||||||||||||| ||||||||||| | ||||| |||||||||| |||| Sbjct 273 TACCCAATTTGGGAAGCAGCTTCAATCGATGAGTGGTTATACAACGGTGGTCCTTACCAA 332 Query 177889 CTCGTTATCTTCCACTTCCTGATCGG--TATCTATGCATACATGGGTCGTGAGTGGGAAC 177946 | | | | |||||| | | || || | || | |||||||||||||| |||||| Sbjct 333 TTAATCGTTTGTCACTTCTTATTAGGAGTAGC-AT-CTTACATGGGTCGTGAATGGGAAT 390 Query 177947 TTTCTTACCGCCTAGGTATGCGTCCCTGGATCTGTGTAGCATACTCTGCTCCAGTCGCCG 178006 | |||||||| ||||||||||||| ||||||| ||||| | |||||||||||| || | Sbjct 391 TATCTTACCGTTTAGGTATGCGTCCTTGGATCTTCGTAGCTTTCTCTGCTCCAGTAGCAG 450 Query 178007 CAGCATCTGCTGTATTCCTTGTTTATCCTTTCGGTCAAGGTTCTTTCTCTGACGCTATGC 178066 |||| ||||| |||||| | || || || | ||||||||||| |||||||| | ||||| Sbjct 451 CAGCTTCTGCAGTATTCTTAGTATACCCAATTGGTCAAGGTTCATTCTCTGATGGTATGC 510 Query 178067 CCCTGGGTATCAGTGGCACCTTCAACTACATGCTTGTCTTCCAAGCAGAGCACAACATCC 178126 | | ||||| ||| || ||||||| |||| | || |||||||| ||||||||||| Sbjct 511 CTTTAGGTATTTCTGGTACTTTCAACTTCATGTTAGTATTCCAAGCTGAGCACAACATTT 570 Query 178127 TGATGCACCCCTTCCACATGTTGGGCGTCGCTGGTGTCTTTGGTGGTTCTCTGTTCAGTG 178186 | |||||||| ||||||||| || || |||||||| |||||||||||| | ||| | Sbjct 571 TAATGCACCCATTCCACATGGCTGGTGTTGCTGGTGTATTTGGTGGTTCTTTATTCTCAG 630 Query 178187 CGATGCACGGTTCTCTGGTTACTTCCTCGCTGGTTCGTGAAACCACCGAGAACGAAAGTC 178246 | ||||||||||| | || ||||| || | |||||||||| || || | |||| || Sbjct 631 CTATGCACGGTTCATTAGTAACTTCTTCTTTAATTCGTGAAACAACTGAAAGCGAA--TC 688 Query 178247 A--GAACTATGGTTACAAGTTCGGTCAAGAAGAAGAGACCTACAACATCGTTGCTGCTCA 178304 | ||||| |||||||| ||||||||||||||||| || |||||||||||||| ||||| Sbjct 689 AACTAACTACGGTTACAAATTCGGTCAAGAAGAAGAAACTTACAACATCGTTGCAGCTCA 748 Query 178305 TGGTTACTTCGGTCGCCTGATCTTCCAATACGCATCCTTCAACAACTCCCGTTCGCTGCA 178364 |||||||||||||| | |||||||||||||| || ||||||||||| ||| | | || Sbjct 749 CGGTTACTTCGGTCGTTTAATCTTCCAATACGCTTCATTCAACAACTCTCGTGCTTTACA 808 Query 178365 CTTCTTCCTCGCAGCATGGCCTGTTGTCGGTATCTGGTTCACTGCTCTTGGTGTTAGCAC 178424 ||||||| | || |||||| ||| | ||||||||||| |||||| | ||| |||| || Sbjct 809 CTTCTTCTTAGCTTTATGGCCAGTTTTAGGTATCTGGTTAACTGCTATGGGTATTAGTAC 868 Query 178425 CATGGCATTCAACCTCAACGGTTTCAACTTCAACCAGTCCATCATGGATAGTCAGGGCAA 178484 ||||| |||||| | |||||||||||||||||||| || | | ||| || || Sbjct 869 TATGGCGTTCAACTTAAACGGTTTCAACTTCAACCAATCAGTTGTAGATTCACAAGGTCG 928 Query 178485 AGTCCTGAACACCTGGGCAGACGTTCTCAACCGTGCTGGTCTTGGTATGGAAGTCATGCA 178544 || | ||||| ||||| || | | |||||||||| | | ||||||||||| ||||| Sbjct 929 TGTAATCAACACTTGGGCTGATATCGTTAACCGTGCTGATTTAGGTATGGAAGTAATGCA 988 Query 178545 CGAGCGTAATGCTCACAACTTCCCTCTTGACCTCGCTGCTGCTGAAAGCACT-CCTGTTG 178603 ||| ||||| || ||||||||||| | || | ||| | | || ||| | | || |||| Sbjct 989 CGAACGTAACGCGCACAACTTCCCATTAGATTTAGCTTCAGGTG-AAGTATTACCAGTTG 1047 Query 178604 CTCTCACCGCACCTGCTGTT 178623 || | || || || |||||| Sbjct 1048 CTTTAACAGCTCCAGCTGTT 1067 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596239847101760