Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ephydra_20gracilis_20[genbank_20GCA_5F001014675.1_202015-05-28] 61,434 sequences; 410,872,512 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq56942 120 3e-22 seq4449 109 6e-19 >seq56942 Length=2534 Score = 120 bits (132), Expect = 3e-22 Identities = 168/233 (72%), Gaps = 2/233 (1%) Strand=Plus/Plus Query 40685 GAAAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAG 40744 ||||||||||||| || || |||||||| || || || || || || | || || ||| Sbjct 49 GAAAAATGCAAATCTTTGTGAAAACGCTGACTGGTAAGACGATTACGCTGGAAGTTGAAC 108 Query 40745 CCACCGACA-GCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCG 40803 | | |||| | || || | |||| | ||||||| || |||||||| || || | Sbjct 109 CATCGGACACGATTGAGAATG-TCAAAGCGAAAATTCAAGATAAAGAGGGTATACCGCCA 167 Query 40804 GACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGAC 40863 || |||||||| || |||| ||| ||||||||||| || || | ||||| | |||| Sbjct 168 GATCAGCAACGTCTGATCTTCGCTGGCAAACAGCTCGAAGATGGACGCACATTGTCCGAC 227 Query 40864 TACAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 |||||||| || ||||| | ||||| || | || ||||| || | ||||| Sbjct 228 TACAACATACAAAAGGAATCGACGCTTCACTTGGTTTTGCGTCTGCGTGGCGG 280 >seq4449 Length=67262 Score = 109 bits (120), Expect = 6e-19 Identities = 155/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746 || ||||| || ||||| || || || ||||||||||||||||| | || || || || Sbjct 64278 AACATGCAGATCTTCGTTAAGACCCTAACGGGCAAAACCATCACTCTTGAGGTTGAGCCC 64337 Query 40747 ACCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGAC 40806 | || | | ||| |||| | || |||| ||||||||||| || || | || Sbjct 64338 TCTGATACTATCGAAAATGTCAAAGCCAAGATTCAGGACAAAGAGGGAATTCCTCCAGAT 64397 Query 40807 CAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 40866 || || || | || | || |||||||||||||| || | ||||||||| |||||| Sbjct 64398 CAACAGCGTTTGATATTTGCTGGCAAACAGCTGGAAGATGGCCGCACCCTCTCTGACTAC 64457 Query 40867 AACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904 || ||||| || || | || ||||| | |||||||| Sbjct 64458 AATATCCAAAAAGAATCTACTTTGCATTTGGTGTTGCG 64495 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 514823550295840