Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ephydra_20gracilis_20[genbank_20GCA_5F001014675.1_202015-05-28] 61,434 sequences; 410,872,512 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq27183 168 5e-37 >seq27183 Length=12736 Score = 168 bits (186), Expect = 5e-37 Identities = 311/449 (69%), Gaps = 8/449 (2%) Strand=Plus/Plus Query 97001 TTAGTGTTGGGAAAGGCCTGGGAGTTCGCGTA--AGCTGCTCTGTGAGAGCATCAATGTG 97058 |||| |||||||||| || || || ||| | | |||||| |||| | |||| ||| Sbjct 6243 TTAGCTTTGGGAAAGGTCTTGG--TTTGCGGACCAATTGCTCTTTGAGCGGTTCAACGTG 6300 Query 97059 ATTCACATAAATGTGAGCATCTCCTAAAGTGTGAATAAATTCTCCAGGAACTAAATCAGT 97118 ||| || | ||| | ||| || | ||||| | ||| || || || || | || Sbjct 6301 ATTTTTGTAGACGTGCGTATCGCCGAGGGTGTGCACAAAGTCGCCGGGCTTCAAGCCTGT 6360 Query 97119 GACATGGGCGATCATACAAGTTAATAGAGAATAGCTAGCAATGTTAAAAGGCACCCCTAG 97178 || || || |||||| | |||||||| | ||| ||||| || || ||||| || | Sbjct 6361 GATGTGCGCTATCATATATGTTAATAGCGCATAAGAGGCAATATTGAAGGGCACGCCCAA 6420 Query 97179 TCCCATATCAGCTGATCTTTGATATAACTGACAGGAAAGCTTTCCATCACACACATAAAA 97238 |||||||| || | ||||| |||||||| || |||| |||| | ||||| | || Sbjct 6421 ACCCATATCGGCGCTGCGCTGATACAACTGACACGATAGCTCACCATTAGACACAAAGAA 6480 Query 97239 CTGACTCAATACA-TGACAGGGGGGCAACGCCATTTTTGGAACATCTAAGACATTCCAAG 97297 || || ||| ||||| || ||||||||||||| || | ||| | |||||||| Sbjct 6481 TTGTGCTAA-ACAGTGACATGGCGGCAACGCCATTTGCGGTATATCAACAGGATTCCAAG 6539 Query 97298 CACACATCAACATTCTTCTATCGGTTGGGTTTGTGTGTATGGTATTAATTATCTGCTTTA 97357 | |||| | || | || ||| ||||| |||||| ||||||| || || | ||| | | Sbjct 6540 CGGACATAATAATGCGTCGATCTGTTGGATTTGTGCGTATGGTGTTTATAACCTGTTGCA 6599 Query 97358 ATTGATCAACGCCTTCTCCACCATAATTGTGCTTAAGACCT-TGATATTCTGCTCCAAAA 97416 ||||||| |||||||| || | || | || | | | | | ||||| || |||||| Sbjct 6600 ATTGATCGACGCCTTCGCCGCTGTAGTCGT-CATGGCATGTCTTATATTTGGCACCAAAA 6658 Query 97417 TGCCTCCATTGGAATCCATAAACAGGTCC 97445 || | ||| || || |||||||| || || Sbjct 6659 TGGCGCCACTGAAAGCCATAAACCGGCCC 6687 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346524353499380