Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ephydra_20gracilis_20[genbank_20GCA_5F001014675.1_202015-05-28]
61,434 sequences; 410,872,512 total letters
Query= NC_001987.1
Length=108409
Score E
Sequences producing significant alignments: (Bits) Value
seq27183 168 5e-37
>seq27183
Length=12736
Score = 168 bits (186), Expect = 5e-37
Identities = 311/449 (69%), Gaps = 8/449 (2%)
Strand=Plus/Plus
Query 97001 TTAGTGTTGGGAAAGGCCTGGGAGTTCGCGTA--AGCTGCTCTGTGAGAGCATCAATGTG 97058
|||| |||||||||| || || || ||| | | |||||| |||| | |||| |||
Sbjct 6243 TTAGCTTTGGGAAAGGTCTTGG--TTTGCGGACCAATTGCTCTTTGAGCGGTTCAACGTG 6300
Query 97059 ATTCACATAAATGTGAGCATCTCCTAAAGTGTGAATAAATTCTCCAGGAACTAAATCAGT 97118
||| || | ||| | ||| || | ||||| | ||| || || || || | ||
Sbjct 6301 ATTTTTGTAGACGTGCGTATCGCCGAGGGTGTGCACAAAGTCGCCGGGCTTCAAGCCTGT 6360
Query 97119 GACATGGGCGATCATACAAGTTAATAGAGAATAGCTAGCAATGTTAAAAGGCACCCCTAG 97178
|| || || |||||| | |||||||| | ||| ||||| || || ||||| || |
Sbjct 6361 GATGTGCGCTATCATATATGTTAATAGCGCATAAGAGGCAATATTGAAGGGCACGCCCAA 6420
Query 97179 TCCCATATCAGCTGATCTTTGATATAACTGACAGGAAAGCTTTCCATCACACACATAAAA 97238
|||||||| || | ||||| |||||||| || |||| |||| | ||||| | ||
Sbjct 6421 ACCCATATCGGCGCTGCGCTGATACAACTGACACGATAGCTCACCATTAGACACAAAGAA 6480
Query 97239 CTGACTCAATACA-TGACAGGGGGGCAACGCCATTTTTGGAACATCTAAGACATTCCAAG 97297
|| || ||| ||||| || ||||||||||||| || | ||| | ||||||||
Sbjct 6481 TTGTGCTAA-ACAGTGACATGGCGGCAACGCCATTTGCGGTATATCAACAGGATTCCAAG 6539
Query 97298 CACACATCAACATTCTTCTATCGGTTGGGTTTGTGTGTATGGTATTAATTATCTGCTTTA 97357
| |||| | || | || ||| ||||| |||||| ||||||| || || | ||| | |
Sbjct 6540 CGGACATAATAATGCGTCGATCTGTTGGATTTGTGCGTATGGTGTTTATAACCTGTTGCA 6599
Query 97358 ATTGATCAACGCCTTCTCCACCATAATTGTGCTTAAGACCT-TGATATTCTGCTCCAAAA 97416
||||||| |||||||| || | || | || | | | | | ||||| || ||||||
Sbjct 6600 ATTGATCGACGCCTTCGCCGCTGTAGTCGT-CATGGCATGTCTTATATTTGGCACCAAAA 6658
Query 97417 TGCCTCCATTGGAATCCATAAACAGGTCC 97445
|| | ||| || || |||||||| || ||
Sbjct 6659 TGGCGCCACTGAAAGCCATAAACCGGCCC 6687
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 346524353499380
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |