Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ephydra_20gracilis_20[genbank_20GCA_5F001014675.1_202015-05-28] 61,434 sequences; 410,872,512 total letters Query= NC_002188.1 Length=288539 Score E Sequences producing significant alignments: (Bits) Value seq32255 122 2e-22 >seq32255 Length=22131 Score = 122 bits (134), Expect = 2e-22 Identities = 213/302 (71%), Gaps = 6/302 (2%) Strand=Plus/Plus Query 189450 TATGGAACGCGTCACAAATGCAGATGGTGAGAGAAGGAAAAATGCATAGTTTTTTACGAA 189509 ||||||| | ||||| ||||| ||||| | || || |||||||| | ||||| || | Sbjct 3516 TATGGAATTCCGCACAATTGCAGTTGGTGCGCGAGGGCAAAATGCACGGGTTTTTGCGCA 3575 Query 189510 TGTATTGGGCTAAGAAGATACTTGAATGGACTAGAA-CACCTGAAGACGCTTTGAGTTAT 189568 |||||||||| |||||||| || |||||||| |||| | || ||| | || || || Sbjct 3576 TGTATTGGGCGAAGAAGATTCTCGAATGGAC-AGAATCGCCGGAACAGGCACTGGAGTAC 3634 Query 189569 AGTATCTATTTGAACAACAAGTACGAACTAGACGGCACG-GATCCTAACGGATACGTAGG 189627 || | ||||| |||| || |||| || ||| ||||| | || || || || Sbjct 3635 GCCATTTTGTTGAATGACAAATATAGCTTAGATGG-ACGCGATCCAAGTGGCTATGTTGG 3693 Query 189628 TTGTATGTGGTCTATTTGCGGATTACACGA-TAGAGCGTGGAAAGAAAGACCGATATTTG 189686 ||||||||||| ||| ||||| | || || || || ||| || | | || || | Sbjct 3694 CTGTATGTGGTCCATTGGCGGAGTGCATGACCAGGGC-TGGGCTGAGCGTGCCATCTTCG 3752 Query 189687 GAAAGATAAGATATATGAATTATGAGAGTTCTAAGAAGAAATTTGATGTTGCTGTATTTA 189746 | |||||| | | ||||||||| || | | |||| ||||||||||| |||| ||| Sbjct 3753 GTAAGATACGTTTCATGAATTATCAGGGATGTAAGCGCAAATTTGATGTGGCTGCTTTTG 3812 Query 189747 TA 189748 || Sbjct 3813 TA 3814 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 922487854097360