Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ephydra_20gracilis_20[genbank_20GCA_5F001014675.1_202015-05-28] 61,434 sequences; 410,872,512 total letters Query= NC_002520.1 Length=232392 Score E Sequences producing significant alignments: (Bits) Value seq4449 95.1 2e-14 seq10185 89.7 8e-13 >seq4449 Length=67262 Score = 95.1 bits (104), Expect = 2e-14 Identities = 94/122 (77%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 146066 AATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAAAGAGTTCTGCTATCA 146125 || |||||||| |||||||||||||| ||||| || || || || || | || ||| Sbjct 64492 AACACCAAATGCAAAGTAGATTCTTTTTGGATATTGTAGTCAGAGAGGGTGCGGCCATCT 64433 Query 146126 TCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGAATTCCTTCTTTATCT 146185 || | ||||| |||||||| ||||| | || ||||| ||||||||||| ||||| || Sbjct 64432 TCCAGCTGTTTGCCAGCAAATATCAAACGCTGTTGATCTGGAGGAATTCCCTCTTTGTCC 64373 Query 146186 TG 146187 || Sbjct 64372 TG 64371 >seq10185 Length=35228 Score = 89.7 bits (98), Expect = 8e-13 Identities = 144/215 (67%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 146069 ACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAAAGAGTTCTGCTATCATCT 146128 |||| ||| | || || ||||| |||||||| || || | || | | ||| || Sbjct 2557 ACCAGATGAAGTGTTGACTCTTTCTGGATATTATAGTCAGATAATGTGCGTCCATCTTCC 2616 Query 146129 AATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGAATTCCTTCTTTATCTTGN 146188 ||||| || |||||||||||||| | ||||||||| || ||||| |||||||||||||| Sbjct 2617 AATTGCTTACCAGCAAAAATCAAACGTTGCTGATCTGGTGGAATACCTTCTTTATCTTGA 2676 Query 146189 NNNNNNNNNNNNNNNNNNNNNNNAGTATCTGAACTTTCTACTTCTAGTGTGATTGTTTTA 146248 |||||| ||| |||||| || | || || ||||| Sbjct 2677 ATTTTAGCTTTTACATTCTCGATAGTATCCGAAGGTTCTACCTCCAAGGTAATAGTTTTC 2736 Query 146249 CCTGTTAATGTTTTAATGAATATTTGCATTTTATT 146283 || || | ||||| | || ||||||||||| || Sbjct 2737 CCGGTAAGAGTTTTTACAAAGATTTGCATTTTGTT 2771 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 742955427489280