Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ephydra_20gracilis_20[genbank_20GCA_5F001014675.1_202015-05-28] 61,434 sequences; 410,872,512 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq27183 172 4e-38 >seq27183 Length=12736 Score = 172 bits (190), Expect = 4e-38 Identities = 387/571 (68%), Gaps = 9/571 (2%) Strand=Plus/Minus Query 20213 AAGAGGGGGATTTGGGTCCTGTGTATGGATTTCAATGGAGACATTTTGGAGCTGAATATG 20272 ||| ||| |||||||| || || ||||| ||||| ||| | |||||||| || ||||| Sbjct 6701 AAGCGGGCGATTTGGGGCCGGTTTATGGCTTTCAGTGGCGCCATTTTGGTGCCAAATATA 6642 Query 20273 TTGACATGAACACAA--ATTATTTTGGACAAGGAGTAGATCAATTACAAAATGTTATTAA 20330 |||||| || | | || || |||| || |||||||| ||| | ||||| || Sbjct 6641 A-GACATGC-CATGACGACTACAGCGGCGAAGGCGTCGATCAATTGCAACAGGTTATAAA 6584 Query 20331 TTTAATTAAAACGAACCCAAACGACAGAAGAATTATTTTATGCGCCTGGAACGCTAAAGA 20390 || || || |||| || || | |||||| | | ||| ||||| || || Sbjct 6583 CACCATACGCACAAATCCAACAGATCGACGCATTATTATGTCCGCTTGGAATCCTGTTGA 6524 Query 20391 TGTGCCTTTAATGGCTTTGCCTCCATGTCATATGCTATGC-CAATTTTACGTTGCTAATA 20449 | | || |||||| ||||| |||||||| || | || ||||| | || ||||| Sbjct 6523 TATACCGCAAATGGCGTTGCCGCCATGTCAC-TGTTTAGCACAATTCTTTGTGTCTAATG 6465 Query 20450 ATGAATTGTCGTGTCAAATGTATCAACGATCCGCTGATATGGGACTGGGTGTTCCTTTCA 20509 ||| | |||||||| ||||||| || ||| |||||||| |||| || || |||| Sbjct 6464 GTGAGCTATCGTGTCAGTTGTATCAGCGCAGCGCCGATATGGGTTTGGGCGTGCCCTTCA 6405 Query 20510 ATATTGCAAGTTATGCGCTGCTTACGTATATGATTGCACATGTTACAGATTTAAAAACGG 20569 ||||||| ||||||||| | || |||||||| || || | |||| || || | | Sbjct 6404 ATATTGCCTCTTATGCGCTATTAACATATATGATAGCGCACATCACAGGCTTGAAGCCCG 6345 Query 20570 GTGACTTAGTCCACACCATAGGAGACGCGCATATTTACCTTAATCATATAGAACCTTTAA 20629 | ||||| || |||||| | || || |||| | ||| ||||| | ||||| | | Sbjct 6344 GCGACTTTGTGCACACCCTCGGCGATACGCACGTCTACAAAAATCACGTTGAACCGCTCA 6285 Query 20630 AATTACAGTTAACACGACAACCAAAACAATTCCCAACTCTTCGCATTACTCGAACTGTTA 20689 || || || || |||||| || ||||||| || ||||| || | | || Sbjct 6284 AAGAGCAATTGGTCCGCAAACCAAGACCTTTCCCAAAGCTAATCATTAAACG-GCAGGTA 6226 Query 20690 AAG-ATATTAACGATTTTAAAGCTGATGATTTTGTGTTAGAAGGTTATAATCCCCATAAT 20748 || ||||| | ||||| ||| || ||||| | | ||| || || || ||| || Sbjct 6225 GAGCATATTGAGGATTTCAAATTCGAGGATTTCGAGATAGTCGGCTACAACCCCTATCCC 6166 Query 20749 TCAATTCCAATGGAAATGTCTGTTT-AATAT 20778 || | |||||||||| |||||| ||||| Sbjct 6165 AAGATACAAATGGAAATGGCTGTTTGAATAT 6135 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398885120211130