Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ephydra_20gracilis_20[genbank_20GCA_5F001014675.1_202015-05-28] 61,434 sequences; 410,872,512 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq27183 185 2e-41 >seq27183 Length=12736 Score = 185 bits (204), Expect = 2e-41 Identities = 364/531 (69%), Gaps = 8/531 (2%) Strand=Plus/Minus Query 35319 AGAAGAAGATACACATCTGGAACGCTAATGGGTCGCGGGAATTTTTGGACAGTAGAGGGT 35378 ||||||| |||||||||||| | | ||| | |||| || | | |||||| | |||| Sbjct 6773 AGAAGAATATACACATCTGGGATGGCAATAGCACGCGCGAGTATCTGGACAA-ATTGGGT 6715 Query 35379 TATAC-GATAGAGCAGAGGGAGATTTGGGACCCGTATACGGATTCCAATGGCGTCATTTT 35437 | ||| || | | || ||| |||||||| || || || || || || ||||| |||||| Sbjct 6714 TTTACCGAACGCGAAGCGGGCGATTTGGGGCCGGTTTATGGCTTTCAGTGGCGCCATTTT 6655 Query 35438 GGTGCTGAATATGATACCTGTTCTTCCGATTATACTGGAAAGGGTATTGATCAATTGGCC 35497 ||||| ||||| | || || | ||| || | || | || | ||||||||| | Sbjct 6654 GGTGCCAAATATAAGACATGCCATGACGACTACAGCGGCGAAGGCGTCGATCAATTG--C 6597 Query 35498 AATA--TACTAAAGACCCTGAGAGAAAATCCAGATGATAGAAGGATGATTATGACGGCAT 35555 || | | |||| ||| | | ||||||| ||| || | || |||||| | || | Sbjct 6596 AACAGGTTATAAACACCATACGCACAAATCCAACAGATCGACGCATTATTATGTCCGCTT 6537 Query 35556 GGAATCCTATGGATCTTCACCTTATGGCTCTTCCTCCATGCCACATGACT-GCTCAATTT 35614 |||||||| | ||| | | | ||||| | || ||||| ||| || | || ||||| Sbjct 6536 GGAATCCTGTTGATATACCGCAAATGGCGTTGCCGCCATGTCAC-TGTTTAGCACAATTC 6478 Query 35615 TATGTGGCTAATGGAGAATTGTCGTGCCAGTTGTATCAGCGAAGCGGAGATGTCGGGTTG 35674 | |||| ||||||| || | ||||| |||||||||||||| |||| ||| | || ||| Sbjct 6477 TTTGTGTCTAATGGTGAGCTATCGTGTCAGTTGTATCAGCGCAGCGCCGATATGGGTTTG 6418 Query 35675 GGCGTGCCCTTCAATATTGCATCATACTCTCTTCTGACTCATCTGATGGCCAGTATGGTG 35734 |||||||||||||||||||| || || | || | || || |||| || || Sbjct 6417 GGCGTGCCCTTCAATATTGCCTCTTATGCGCTATTAACATATATGATAGCGCACATCACA 6358 Query 35735 GGTCTAAAACCGGGAGAGTTTATCCTCACTCTTGGTGACGCACACATTTATAATACCCAC 35794 || | || || || || ||| | | ||| || || || | ||| | || || | ||| Sbjct 6357 GGCTTGAAGCCCGGCGACTTTGTGCACACCCTCGGCGATACGCACGTCTACAAAAATCAC 6298 Query 35795 ATTGAGGTGTTAAAGAAGCAGTTGTGCCGCGTCCCTAGACCATTCCCTAAG 35845 |||| | | || |||| ||| |||| || ||||| ||||| ||| Sbjct 6297 GTTGAACCGCTCAAAGAGCAATTGGTCCGCAAACCAAGACCTTTCCCAAAG 6247 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 988805075549470