Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ephydra_20gracilis_20[genbank_20GCA_5F001014675.1_202015-05-28] 61,434 sequences; 410,872,512 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq37138 585 3e-162 >seq37138 Length=11844 Score = 585 bits (648), Expect = 3e-162 Identities = 1240/1842 (67%), Gaps = 14/1842 (1%) Strand=Plus/Plus Query 62067 GCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGACCGAGACT-CCATCCGTAAAA 62125 || ||||| || || | ||| |||||||| ||||| || || ||| | ||| |||| || Sbjct 3593 GCTGGTTTTGTGCGCAAATAATACATTCCAGTTTTAAGGCC-AGATTTCCAAGCGTAGAA 3651 Query 62126 ATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATATTCATAGATTGACT 62185 ||| || |||| || ||| | || ||||| | || || || | ||| ||||| Sbjct 3652 ATGAATTGATGTTAACTTTCCATAGTTGGGTTCTGCAACGTGAATGTTAAAAGACTGACT 3711 Query 62186 TTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCTTTTGTGCAATTTC 62245 |||||| || || ||||| || || || |||||||| || ||| || || |||||| Sbjct 3712 TTGATCAATAAAAGCTCCTCTATCAGCTGCCATTTTAATTGTCGATTTAACTGAAATTTC 3771 Query 62246 CCAAATAGTTTTATA-AACTCGCTTAATATCTTCTGGAAGGTTTGTAT--TCTGAATGGA 62302 ||||| || || || || || | | ||| | | |||| ||| | || || || Sbjct 3772 CCAAACTGTCTTGTATAAGTCACGAATGGACTTAGGAATAGTTTCTATATTTTGTATAGA 3831 Query 62303 TCCACCATCTACCATAATCCTATTCTTGATCTCATCATTCCATAATTTTCTCTCGGTTAA 62362 |||| | ||||| ||| || || | |||| |||||||| ||||||| Sbjct 3832 ACCACGGCTTGATATAATTTGATTTTTCATGTTGTCATCCCATAATTCAAGTTCGGTTAG 3891 Query 62363 AACTCTAAGGAGATGCGGGTTAACTACTTGGAATTCTCCAGACAATACTCTCCGAGTGTA 62422 | |||| || || || | ||||| ||||||||||| ||||| || || | || ||||| Sbjct 3892 ATCTCTGAGAAGGTGATGATTAACAACTTGGAATTCACCAGATAAAACACGCCTGGTGTA 3951 Query 62423 AATATTACTGGTATACGGTTCCACCGACTCATTATTTCCCAAAATTTGAGCAGTTGATGC 62482 |||||| ||||| ||||| | || |||||||| || | ||||||||| |||||||| Sbjct 3952 TATATTAGAAGTATAAGGTTCAAAGGATTCATTATTCCCAAGAATTTGAGCTGTTGATGC 4011 Query 62483 AGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGACCGTATGTTCTGATTTTATCTTT 62542 || ||||| || || || | |||| ||||| | || || || ||| | || || Sbjct 4012 TGTAGGCATGGGAGCAACAAGTAAAGAATTTCGTATGCCATACTTTTGAATTCTCTCCTT 4071 Query 62543 TAGATGTTCCCAATTCCAAAGATCCGACGGTACAACANNNNNNNNNNNATATTGTAGAAT 62602 || | | ||||| ||| | | | || |||| ||||||| || Sbjct 4072 TAAAGCATTCCAATCCCACAAGTTTGTTGGCGTAACATTCCACATGTCGTATTGTAATAT 4131 Query 62603 ACCGTTACTGGC-GTACGATCCTACATATGTATCATATGGTCCTTCCTTCTCAGCTAGTT 62661 || || || | | || ||| |||||| ||||| || || | || |||| || Sbjct 4132 GCCTTTGCTTACAGGACTC-CCTTCATATGATTCATAAGGACCGAACACTTCCGCTAATT 4190 Query 62662 TACAACTCGCCTCTAATGCACCGTAATAAATGGTTTCAAAGATCTTCTTATTTAGATCTT 62721 ||| || ||||||||||| || || || || |||||||| || | ||||||| | Sbjct 4191 CACAGCTTGCCTCTAATGCTCCATAGTAGATTGTTTCAAATATTTGTATATTTAGCAAAT 4250 Query 62722 GTGCTTCCGGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCCGCTAATCCTTGAA 62781 ||||| | ||| ||| |||||||| | || |||| || || || || || |||| Sbjct 4251 ATGCTTGCTCGCTTTCATATGGATAACGCATCAGTATAAGTGCATCTGCAAAACCCTGAA 4310 Query 62782 CACCAATACCGATAGGTCTATGTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAAT 62841 | ||||| || || |||| ||| ||| ||||||| | | ||||| |||| |||||||| Sbjct 4311 CTCCAATTCCTATGGGTCGATGCCTCATATTAGATTTCTTGGCTTCAGGAAGAGGATAAT 4370 Query 62842 AATTAATATCTATAATTTTATTGAGATTTCTGACAATTACTTTGACCACATCCTTCAGTT 62901 |||| |||||||| |||||||| | |||| | || ||| || || || || | Sbjct 4371 AATTTATATCTATGATTTTATTCAAATTTTTTGTAACAGTTTTAGTTACTTCTTTAAGCT 4430 Query 62902 TGAGAAAATCAAATCGCCCATCTATTACA----AACATGTTCAATGCAACAGATGCCAGA 62957 | |||||||| | | || || | | |||||||| | |||| |||||| ||| Sbjct 4431 TTTGAAAATCATAAGACTTAT-TAGCAGAAATGAACATGTTAAGAGCAATAGATGCTAGA 4489 Query 62958 TTACACACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTA 63017 || || ||||||| ||||| | | | ||||| | || ||||| || | ||| || Sbjct 4490 TTGCAAACGGCTATCTCATCTGGCGCTGAATATTCGACAATTTCAGTACACAAATTGCTG 4549 Query 63018 CACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGA 63077 || ||||| || || | ||||| ||||||||| ||| ||||||| | ||||||||| | Sbjct 4550 CATTTGATGGTACCAATATTTTTTTGATTACTTTTTCTGTTACAAGAATCCTTATACAAC 4609 Query 63078 ATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGA-CGACTCGAGC 63136 || | || || || ||||| | || | ||| || || || ||| | |||| |||| Sbjct 4610 ATATACGGTGTTCCTGTTTCTACTTGGGCTTCAATGATAGCAAACCAAAGTGACT-GAGC 4668 Query 63137 CTTTATTATAGATTTGTATCTCCTTTCTCTTTCGTATAGAGTATACAATCGTTCGAACTC 63196 || ||| | ||| | | | |||| |||| ||| ||| || ||| || || Sbjct 4669 TTTAATTTTCCTATTGAAACGGCCTTCTTTTTCATATTTTTCATATAACTCTTCAAATTC 4728 Query 63197 GTCTCCCCAAACATTGTCCAATCTAGGACATTCATCCGGACACATCAACGACCACTCTCC 63256 ||||||||||| | || | | ||||||| | |||||||| | ||||| || || Sbjct 4729 TTCTCCCCAAACTTCATCAAGCCCTGGACATTTGTGGGGACACATAAGTGACCAGTCGCC 4788 Query 63257 GTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCT 63316 ||| | || ||| |||| || |||||||||||||| || || ||||| ||||| Sbjct 4789 ATCAGATTCTACGCGTCTCATGAACAGATCAGGAATCCAGAGGGCGTAAAATAAGTCTCT 4848 Query 63317 TGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGA 63376 || ||| |||||||| ||||||||||| ||||| | || | ||| | | |||||| || Sbjct 4849 TGCTCTGTGTTCCTCTTTTCCTGTATTTTTTTTTAAGTCTAAAAACTCGAAAATATCCGA 4908 Query 63377 ATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTAT 63436 |||||| || || |||||||| || | | ||||||| ||| || ||||| |||| Sbjct 4909 ATGCCAAGGCTCTAAGTATATAGCAAACGCACCAGGCCTTTTTCCGCCACCCTGGTCTAC 4968 Query 63437 GTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGATATACCATT 63496 || | || ||||| | || || ||||| || | | || || ||| | ||||| Sbjct 4969 ATAACGTGCTACATTATTGAACACCCTTAACATAGGCACTAAGCCATTAGATGTGCCATT 5028 Query 63497 GGTACCGGAGATATAGCCTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCC 63556 || ||| | || | ||| | || |||||| | || || || ||||| || Sbjct 5029 AGTGCCGCATATTGATGTTCCTTTAGCTCGAATACAATGAACATTTATTCCAATTCCTCC 5088 Query 63557 TGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATGCCTTCTATGCTATC 63616 || |||||| || | ||| || ||| | | | | | || ||||| || ||| Sbjct 5089 CGCTGATTTAGAAATCATTGCACACTGTTCAACTGATTTAAAAATTCCTTCAATTGAATC 5148 Query 63617 ATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGAGTAGTTCCCGCATTAAA 63676 | | ||| |||| | |||||| || | || | || | ||| | || ||| Sbjct 5149 TGCTACCATTGTAAGCAAAAAACAAGATGATAACTGAGGGCGTCTTGTTGCAGCCGCAAA 5208 Query 63677 TAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGC 63736 ||| || ||||| || || ||||| |||| ||||| || | |||||| || ||||| || Sbjct 5209 TAAAGTTGGAGAGGCATGGGTAAAATATTTCTCAGAGAGCAAATTGTATGTTTCAATTGC 5268 Query 63737 TGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCT 63796 | || ||||| ||| ||||| | | || | ||| ||||||||||| ||||| Sbjct 5269 AGCATCGATATCTTCACCATGTATTCCAATCGATACTCTCATCAACATGTGCTGTGGTCT 5328 Query 63797 TTCAACAATTTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAA 63856 || |||| ||| || | ||| | ||| || || ||| | ||| ||||| ||||| Sbjct 5329 CTCCACAACTTTACCTTTAACTTTAAGCAAATATGAACGTTCAAGAGTCTTAAAGCCAAA 5388 Query 63857 ATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAATT 63898 || |||||| |||||| || || || || || ||||||| Sbjct 5389 GTAATTGTATCCAAAGTCGCGGTCATATATGATTGCCGAATT 5430 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629333947319520