Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ephydra_20gracilis_20[genbank_20GCA_5F001014675.1_202015-05-28] 61,434 sequences; 410,872,512 total letters Query= NC_003389.1 Length=146454 Score E Sequences producing significant alignments: (Bits) Value seq37138 526 2e-144 >seq37138 Length=11844 Score = 526 bits (582), Expect = 2e-144 Identities = 1240/1848 (67%), Gaps = 36/1848 (2%) Strand=Plus/Plus Query 36790 TCAACTGTGAATTTTATAGGATTTGATGCCGATTTTGTTCTCATATAATACATTCCAGTT 36849 ||||| || || | ||| | ||| | || | |||||| | || |||||||||||||||| Sbjct 3566 TCAACAGTAAACTGTATTGCATTAGCGGCTGGTTTTGTGCGCAAATAATACATTCCAGTT 3625 Query 36850 TTTAGCCCCAATCTCCATCCGTAAAAATGCATACTGGTCAGTTTTGCGTATGTAGGATTA 36909 || || || || |||| |||| ||||| || || | ||| | || || || || Sbjct 3626 TTAAGGCCAGATTTCCAAGCGTAGAAATGAATTGATGTTAACTTTCCATA-GTTGGGTTC 3684 Query 36910 T-CTATATATATTGTCATTGATTGACTTTGATCTATAAACGCACCTCTGTCGGCTGCCAT 36968 | | | | || | | || ||||||||||| ||||| || ||||| || |||||||| Sbjct 3685 TGCAACGTGAATGTTAAAAGACTGACTTTGATCAATAAAAGCTCCTCTATCAGCTGCCAT 3744 Query 36969 TTCTAAAATACATTTTTGAGATATCTCCCAAACCGTTTTATATATTTGTTTTATATTATC 37028 || | | |||| || || |||||||| || || |||| | || | Sbjct 3745 TTTAATTGTCGATTTAACTGAAATTTCCCAAACTGTCTTGTATAAGTCACGAATGGACTT 3804 Query 37029 TGGTAAA---TCTAAATGTTGAATAGAACCATTATGTAACACAATTGTATTCTTTATGTC 37085 || | | |||| || ||| ||||||||| | | | |||| ||| || |||| Sbjct 3805 AGGAATAGTTTCTATATTTTGTATAGAACCACGGCTTGATATAATTTGATTTTTCATGTT 3864 Query 37086 ATTATTCCACATATTTCTACTTA--TTAGTTCTCTCAATAGGTGTGGATTTACAACCTGA 37143 | || ||| || ||| | || |||| ||||| | ||||| |||| ||||| || Sbjct 3865 GTCATCCCA--TAATTCAAGTTCGGTTAGATCTCTGAGAAGGTGATGATTAACAACTTGG 3922 Query 37144 AAATCTCCAGATAATACTCTTCTTGTATATATATTGCTAGTATATGGTTCAATGGACTCA 37203 || || |||||||| || | || || |||||||| |||||| ||||||| ||| ||| Sbjct 3923 AATTCACCAGATAAAACACGCCTGGTGTATATATTAGAAGTATAAGGTTCAAAGGATTCA 3982 Query 37204 TTATTACTTAATATTTGAGATGTAGATGCAGTAGGCATTGGTGCTATTAGAAGGCTATTT 37263 ||||| | | ||||||| ||| ||||| |||||||| || || | || | |||| Sbjct 3983 TTATTCCCAAGAATTTGAGCTGTTGATGCTGTAGGCATGGGAGCAACAAGTAAAGAATTT 4042 Query 37264 CTCAATCCATGTGTATTAATTCTCTTTTTTAGTTCATTCCAATCCCATAAATCTGTTGG- 37322 | | |||| | | |||||||| |||| ||||||||||||| || | |||||| Sbjct 4043 CGTATGCCATACTTTTGAATTCTCTCCTTTAAAGCATTCCAATCCCACAAGTTTGTTGGC 4102 Query 37323 GT-TCTTTAACCACATATCATATTGTAGAATACCTTTACTCGCTGGAGAATCGTTATATG 37381 || | || |||||| || ||||||| || ||||| || | ||| | | ||||| Sbjct 4103 GTAACATT--CCACATGTCGTATTGTAATATGCCTTTGCTTACAGGACTCCCTTCATATG 4160 Query 37382 TCTCATAAGGTCCGTAAATTTTAGCTAGTTCGCAACTAGATTCTAGTGCGGCATAATATA 37441 |||||||| ||| | | || |||| ||| || || | |||| ||| |||| || | Sbjct 4161 ATTCATAAGGACCGAACACTTCCGCTAATTCACAGCTTGCCTCTAATGCTCCATAGTAGA 4220 Query 37442 TTGTTTCGAAAATTTGTATATTTAATATTTTTGCTTCTTCGCTATCGAATGCATAGCCCA 37501 ||||||| || ||||||||||||| | | ||||| ||||| || ||| ||| | || Sbjct 4221 TTGTTTCAAATATTTGTATATTTAGCAAATATGCTTGCTCGCTTTCATATGGATAACGCA 4280 Query 37502 ATAATATAAACACATCAGCCAAACCCTGAACACCGATACCTATGGGTCTATGTTTCTTAT 37561 | ||||| |||| || ||||||||||| || || |||||||||| ||| || ||| Sbjct 4281 TCAGTATAAGTGCATCTGCAAAACCCTGAACTCCAATTCCTATGGGTCGATGCCTCATAT 4340 Query 37562 TAGATCTAGACGATTCTATCACTGGATAATAATTGATATCTATTATTTTATTTAGATTTT 37621 ||||| | | ||| | ||||||||||| |||||||| |||||||| | ||||| Sbjct 4341 TAGATTTCTTGGCTTCAGGAAGAGGATAATAATTTATATCTATGATTTTATTCAAATTTT 4400 Query 37622 ---TAACTAGTATTTTCGTAATTATTCTCAACTTGTCGAACAT--AAATACGTTATTATT 37676 |||| || |||| || | | | | | ||| | ||| || || || |||||| Sbjct 4401 TTGTAAC-AG--TTTTAGTTACTTCTTTAAGCTT-TTGAAAATCATAAGAC-TTATTA-G 4454 Query 37677 AACAAATTTAC----TCAACGAAATAGATCCTAGATTACATACAGCAACTTCATCT-TCG 37731 | |||| || | | | ||||||| ||||||| || || || | |||||| || Sbjct 4455 CAGAAATGAACATGTTAAGAGCAATAGATGCTAGATTGCAAACGGCTATCTCATCTGGCG 4514 Query 37732 TTACTAAATTGTATAATCTCTGTACAGAGATTACTCGATCTAATTGTTCCCAAATTGCTT 37791 | | ||| | ||| || ||||| | ||| || || | || || || | ||| || Sbjct 4515 CT-GAATATTCGACAATTTCAGTACACAAATTGCTGCATTTGATGGTACCAATATTTTTT 4573 Query 37792 TGATTGGATTTTTTATTACAAGAATCTTTATATAGTATATACGGCGTTCCTTGTTCTATT 37851 ||||| |||| | ||||||||||| ||||| | |||||||| |||||| ||||| | Sbjct 4574 TGATTACTTTTTCTGTTACAAGAATCCTTATACAACATATACGGTGTTCCTGTTTCTACT 4633 Query 37852 TGAGCCTCGATAATAGATTTCCATAAACTTCT-TGCTTTAACGATCGCTTT--AAttttt 37908 || || || || |||| ||| || || ||||||| || || || Sbjct 4634 TGGGCTTCAATGATAGCAAACCA-AAGTGACTGAGCTTTAATTTTCCTATTGAAACGGCC 4692 Query 37909 ttCTTTGTTTCGTATTCTATATATAATTTGTTAAAATCATTCCCCCATACATCGCATAAT 37968 ||||| |||| |||| | |||||| | | ||| || | ||||| || || | Sbjct 4693 TTCTT--TTTCATATTTTTCATATAACTCTTCAAATTCTTCTCCCCAAACTTCATCAAGC 4750 Query 37969 CCTGGACATTCGCATGGACACATTAGAGACCATTCTTCATCTTTTTCTACGCGTTCCATA 38028 |||||||||| | |||||||| || ||||| || |||| |||||||||| ||| Sbjct 4751 CCTGGACATTTGTGGGGACACATAAGTGACCAGTCGCCATCAGATTCTACGCGTCTCATG 4810 Query 38029 AATAAATCAGGTACCCATAATGCAGTAAATAAATCTTTGGTTCTATATTCTTCGTTCCCT 38088 || | |||||| | ||| | || |||||| ||| | | ||| | ||| || || ||| Sbjct 4811 AACAGATCAGGAATCCAGAGGGCGTAAAATAAGTCTCTTGCTCTGTGTTCCTCTTTTCCT 4870 Query 38089 ACATTCTTTCTTAAGCTTAGAAAATCGAATATATCAGCGTGCCATGGTTCTATATAAATC 38148 ||| ||| ||||| || ||| ||||| ||||| | ||||| || |||| || || Sbjct 4871 GTATTTTTTTTTAAGTCTAAAAACTCGAAAATATCCGAATGCCAAGGCTCTAAGTATATA 4930 Query 38149 GACATTGCTCCTGGTCTTTTATCACCTCCCTGATTAATATATCTAACTGTGTTATTATAT 38208 | | || || || ||||| | || ||||| | | ||| | || ||||| | Sbjct 4931 GCAAACGCACCAGGCCTTTTTCCGCCACCCTGGTCTACATAACGTGCTACATTATTGAAC 4990 Query 38209 ATTCTTAACATAGGTACTATACCATTAGATTTGCCGTTTATACCGGATATATAAGTACCC 38268 | ||||||||||| |||| ||||||||| |||| || | ||| |||| | || || Sbjct 4991 ACCCTTAACATAGGCACTAAGCCATTAGATGTGCCATTAGTGCCGCATATTGATGTTCCT 5050 Query 38269 TTAGCTCGTATATTACTTATCGACAATCCTATTCCACCTGCATGTTTTGATATTAAAGCG 38328 |||||||| ||| | | | ||| ||||| || || ||| || || | || Sbjct 5051 TTAGCTCGAATACAATGAACATTTATTCCAATTCCTCCCGCTGATTTAGAAATCATTGCA 5110 Query 38329 CATTGTTTTAACGTATCAAATATACCTTCTATACTGTCATCCTTTATTGGTAGTATAAAA 38388 || |||| | | | ||| || ||||| || || | |||| || | |||| Sbjct 5111 CACTGTTCAACTGATTTAAAAATTCCTTCAATTGAATCTGCTACCATTGTAAGCAAAAAA 5170 Query 38389 CAACTAGACATTTGAGGCAATGGAGTTCCGGCGTTAAATAATGTAGGAGATGCATGTATG 38448 ||| || | ||||| | ||| | || |||||| || ||||| ||||| | Sbjct 5171 CAAGATGATAACTGAGGGCGTCTTGTTGCAGCCGCAAATAAAGTTGGAGAGGCATGGGTA 5230 Query 38449 AACCATTTTTCCGACAAATAATTATATGTTTCTATTACATCATCTATATCACCGCCGTGA 38508 || |||| || || | |||| |||||||| ||| || |||| ||||| | || || Sbjct 5231 AAATATTTCTCAGAGAGCAAATTGTATGTTTCAATTGCAGCATCGATATCTTCACCATGT 5290 Query 38509 ATACCTAGAGATACCCTCATTAGCATATGTTGTGGTCTTTCTATTATTTTATTATTCTGT 38568 || || | ||||| ||||| | ||| || |||||||| || | | |||| || | Sbjct 5291 ATTCCAATCGATACTCTCATCAACATGTGCTGTGGTCTCTCCACAACTTTACCTTTAACT 5350 Query 38569 TTAAGTAGATACGATTTTTCTAATGTTTTTATTCCAAAATAACTATAT 38616 ||||| | ||| || ||| | || || | ||||| ||| | ||| Sbjct 5351 TTAAGCAAATATGAACGTTCAAGAGTCTTAAAGCCAAAGTAATTGTAT 5398 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 468165008092960