Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ephydra_20gracilis_20[genbank_20GCA_5F001014675.1_202015-05-28] 61,434 sequences; 410,872,512 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq37138 652 0.0 >seq37138 Length=11844 Score = 652 bits (722), Expect = 0.0 Identities = 1261/1847 (68%), Gaps = 24/1847 (1%) Strand=Plus/Plus Query 78739 GCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGACCGAGACT-CCATCCGTAGAA 78797 || ||||| || || | ||| |||||||| ||||| || || ||| | ||| ||||||| Sbjct 3593 GCTGGTTTTGTGCGCAAATAATACATTCCAGTTTTAAGGCC-AGATTTCCAAGCGTAGAA 3651 Query 78798 ATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATATTCATAGATTGACT 78857 ||| || |||| || ||| | || ||||| | || || || | ||| ||||| Sbjct 3652 ATGAATTGATGTTAACTTTCCATAGTTGGGTTCTGCAACGTGAATGTTAAAAGACTGACT 3711 Query 78858 TTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCTTTTGTGGAATTTC 78917 |||||| || || ||||| || || || |||||||| || ||| || || |||||| Sbjct 3712 TTGATCAATAAAAGCTCCTCTATCAGCTGCCATTTTAATTGTCGATTTAACTGAAATTTC 3771 Query 78918 CCAAATAGTTTTATA-AACTCGCTTAATATCTTCTGGAAGGTTTGTAT--TCTGAATGGA 78974 ||||| || || || || || | | ||| | | |||| ||| | || || || Sbjct 3772 CCAAACTGTCTTGTATAAGTCACGAATGGACTTAGGAATAGTTTCTATATTTTGTATAGA 3831 Query 78975 TCCACCATCTGCCATAATCCTATTCTTGATCTCTTCATTCCATAATTTTCTCTCGGTTAA 79034 |||| || ||||| ||| || || | |||| |||||||| ||||||| Sbjct 3832 ACCACGGCTTGATATAATTTGATTTTTCATGTTGTCATCCCATAATTCAAGTTCGGTTAG 3891 Query 79035 AACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCCAGACAATACTCTCCGAGTGTA 79094 | |||| || || || ||||||| ||||| ||||| ||||| || || | || ||||| Sbjct 3892 ATCTCTGAGAAGGTGATGATTAACAACTTGGAATTCACCAGATAAAACACGCCTGGTGTA 3951 Query 79095 AATATTACTGGTATATGGTTCCACCGATTCATTATTTCCCAAAATTTGAGCAGTTGATGC 79154 |||||| ||||| ||||| | ||||||||||| || | ||||||||| |||||||| Sbjct 3952 TATATTAGAAGTATAAGGTTCAAAGGATTCATTATTCCCAAGAATTTGAGCTGTTGATGC 4011 Query 79155 CGTTGGCATAGGTGCCACCAATAAACTATTTCTAAGACCGTATGATCTGATTTTATCTTT 79214 || ||||| || || || | |||| ||||| | || || | ||| | || || Sbjct 4012 TGTAGGCATGGGAGCAACAAGTAAAGAATTTCGTATGCCATACTTTTGAATTCTCTCCTT 4071 Query 79215 TAGAGATTCCCAATCCCAAAGATCAGACGGGACAACATTCCAAAGATCATATTGTAGAAT 79274 || || | ||||||||| | | | || ||||||||| | || ||||||| || Sbjct 4072 TAAAGCATTCCAATCCCACAAGTTTGTTGGCGTAACATTCCACATGTCGTATTGTAATAT 4131 Query 79275 ACCGTTACTAGCGTATGAT--CCTGTGTATGTTTCATAAGGTCCTTCCTTTTCGGCTAAT 79332 || || || | | || ||| |||| ||||||||| || | ||| |||||| Sbjct 4132 GCCTTTGCTTAC--AGGACTCCCTTCATATGATTCATAAGGACCGAACACTTCCGCTAAT 4189 Query 79333 TCACAACTCGCCTCTAATGCTCCGTAATAAATGGTTTCGAAAATCTTCTTATTGAGATCT 79392 ||||| || |||||||||||||| || || || ||||| || || | |||| || Sbjct 4190 TCACAGCTTGCCTCTAATGCTCCATAGTAGATTGTTTCAAATATTTGTATATTTAGCAAA 4249 Query 79393 TGTGCTTCTAGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGA 79452 | ||||| ||| ||| |||||||| | || |||| || ||||| || || ||| Sbjct 4250 TATGCTTGCTCGCTTTCATATGGATAACGCATCAGTATAAGTGCATCTGCAAAACCCTGA 4309 Query 79453 ACACCAATACCGATAGGTCTATGTCTCTTATTAGAAATTTCAGCTTCTGGAATAGGATAA 79512 || ||||| || || |||| ||| ||| ||||||| | | ||||| |||| ||||||| Sbjct 4310 ACTCCAATTCCTATGGGTCGATGCCTCATATTAGATTTCTTGGCTTCAGGAAGAGGATAA 4369 Query 79513 TAATTAATATCTATAATTTTATTGAGATTCCTGACTATTACTTTGACC-ACATCCTTTAG 79571 ||||| |||||||| |||||||| | ||| | || | ||| | || || || || Sbjct 4370 TAATTTATATCTATGATTTTATTCAAATTTTTTG-TAACAGTTTTAGTTACTTCTTTAAG 4428 Query 79572 TTTGAGAAAATCAAATCGTCCATCTATTA-CA------AACATGTTCAACGCGACAGATG 79624 || |||||||| | | ||||| || |||||||| | || | ||||| Sbjct 4429 CTTTTGAAAATCATAAG----ACTTATTAGCAGAAATGAACATGTTAAGAGCAATAGATG 4484 Query 79625 CCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATTTCAGTGCAGAGGT 79684 | ||||| |||||||||| ||||| | | | ||||| | |||||||| || | | Sbjct 4485 CTAGATTGCAAACGGCTATCTCATCTGGCGCTGAATATTCGACAATTTCAGTACACAAAT 4544 Query 79685 TACTACACTTAATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTAT 79744 | || || || ||||| || | ||||| ||||||||| ||| ||||||| | |||||||| Sbjct 4545 TGCTGCATTTGATGGTACCAATATTTTTTTGATTACTTTTTCTGTTACAAGAATCCTTAT 4604 Query 79745 AAAGAATGAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGAC-GACT 79803 | | || |||| || || ||||| | || | ||| || || || ||| | |||| Sbjct 4605 ACAACATATACGGTGTTCCTGTTTCTACTTGGGCTTCAATGATAGCAAACCAAAGTGACT 4664 Query 79804 CGAGCCTTTATTATAGACTTGTATCTCTTTTCTCTTTCGTATTGTGTATATAATCGTTCG 79863 |||| || ||| | ||| | | |||| |||| |||| | |||||| ||| Sbjct 4665 -GAGCTTTAATTTTCCTATTGAAACGGCCTTCTTTTTCATATTTTTCATATAACTCTTCA 4723 Query 79864 AACTCGTCTCCCCAAACATCGTCTAATCCAGGACATTCGTCAGGACACATCAACGACCAC 79923 || || ||||||||||| || || | || ||||||| || |||||||| | ||||| Sbjct 4724 AATTCTTCTCCCCAAACTTCATCAAGCCCTGGACATTTGTGGGGACACATAAGTGACCAG 4783 Query 79924 TCTCCATCATCCTTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGA 79983 || |||||| | ||| ||| |||| || |||||||||||||| || || ||||| Sbjct 4784 TCGCCATCAGATTCTACGCGTCTCATGAACAGATCAGGAATCCAGAGGGCGTAAAATAAG 4843 Query 79984 TCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATA 80043 ||||| | ||| || ||||| ||||||||||| ||||| | || | ||| | | |||| Sbjct 4844 TCTCTTGCTCTGTGTTCCTCTTTTCCTGTATTTTTTTTTAAGTCTAAAAACTCGAAAATA 4903 Query 80044 TCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGTCGTTTGTTTCCTCCCTGA 80103 || |||||||| || || |||||||| || | | || || | ||| || ||||| Sbjct 4904 TCCGAATGCCAAGGCTCTAAGTATATAGCAAACGCACCAGGCCTTTTTCCGCCACCCTGG 4963 Query 80104 TCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTA 80163 |||| || | || ||||| | || || ||||| || | | ||||| ||||| Sbjct 4964 TCTACATAACGTGCTACATTATTGAACACCCTTAACATAGGCACTAAGCCATTAGATGTG 5023 Query 80164 CCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTATT 80223 ||||| || ||| | || | |||| | || |||||| | || || || ||| Sbjct 5024 CCATTAGTGCCGCATATTGATGTTCCTTTAGCTCGAATACAATGAACATTTATTCCAATT 5083 Query 80224 CCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATG 80283 || || || |||||| || | ||| || ||| | | | | | || || || || Sbjct 5084 CCTCCCGCTGATTTAGAAATCATTGCACACTGTTCAACTGATTTAAAAATTCCTTCAATT 5143 Query 80284 CTATCATCAATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCA 80343 ||| | | ||| |||| | |||||| || | || | || || ||| | || Sbjct 5144 GAATCTGCTACCATTGTAAGCAAAAAACAAGATGATAACTGAGGGCGTCTTGTTGCAGCC 5203 Query 80344 TTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTACGTCTCA 80403 |||||| || ||||| || || ||||| |||| ||||| || | |||||| || ||| Sbjct 5204 GCAAATAAAGTTGGAGAGGCATGGGTAAAATATTTCTCAGAGAGCAAATTGTATGTTTCA 5263 Query 80404 ATAGCTGATTCTATATCCCATTGATGAATTCCTACCGCGACACGCATTAACATGTGCTGA 80463 || || | || ||||| ||| ||||| | || || | ||| ||||||||||| Sbjct 5264 ATTGCAGCATCGATATCTTCACCATGTATTCCAATCGATACTCTCATCAACATGTGCTGT 5323 Query 80464 GGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAAGATTTTTCCAAAGTTTTAAAA 80523 ||||| || || | || || | ||| | ||| || || ||| | ||| ||||| Sbjct 5324 GGTCTCTCCACAACTTTACCTTTAACTTTAAGCAAATATGAACGTTCAAGAGTCTTAAAG 5383 Query 80524 CCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTT 80570 ||||| || |||||| |||||| || || || || || |||| || Sbjct 5384 CCAAAGTAATTGTATCCAAAGTCGCGGTCATATATGATTGCCGAATT 5430 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 717717223431760