Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ephydra_20gracilis_20[genbank_20GCA_5F001014675.1_202015-05-28] 61,434 sequences; 410,872,512 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq37138 616 2e-171 >seq37138 Length=11844 Score = 616 bits (682), Expect = 2e-171 Identities = 1262/1867 (68%), Gaps = 22/1867 (1%) Strand=Plus/Plus Query 70801 GTAAACTGAATGGGAGAGGATGCGGCTTTCGTACGTAGATAGTACATGCCTGTTTTTAGA 70860 |||||||| || | | | || | ||| || || | ||| ||||| || ||||| || Sbjct 3572 GTAAACTGTATTGCATTAGCGGCTGGTTTTGTGCGCAAATAATACATTCCAGTTTTAAGG 3631 Query 70861 CCGAGACT-CCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAGCTAGGATCGGCTAT 70919 || ||| | ||| |||| ||||| || |||| || |||| | || || || | Sbjct 3632 CC-AGATTTCCAAGCGTAGAAATGAATTGATGTTAACTTTCCATAGTTGGGTTCTGCAAC 3690 Query 70920 GTGAATATTCATCGACTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTAT 70979 |||||| || | |||||||||||||| || || ||||| || || || |||||||| || Sbjct 3691 GTGAATGTTAAAAGACTGACTTTGATCAATAAAAGCTCCTCTATCAGCTGCCATTTTAAT 3750 Query 70980 GATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATA-AACTCGCTTAATATCTTCTGGAA 71038 ||| || || ||||||||||| || || || || || | | ||| | | Sbjct 3751 TGTCGATTTAACTGAAATTTCCCAAACTGTCTTGTATAAGTCACGAATGGACTTAGGAAT 3810 Query 71039 GGTTTGTAT--TCTGAATGGATCCACCATCTGCAATAATCCTATTTTTGATCTCTTCATT 71096 |||| ||| | || || || |||| || ||||| |||||| || | |||| Sbjct 3811 AGTTTCTATATTTTGTATAGAACCACGGCTTGATATAATTTGATTTTTCATGTTGTCATC 3870 Query 71097 CCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGGATTAACTACTTGAAATTCTCC 71156 |||||||| ||||||| | |||| || || ||| ||||||| ||||| ||||| || Sbjct 3871 CCATAATTCAAGTTCGGTTAGATCTCTGAGAAGGTGATGATTAACAACTTGGAATTCACC 3930 Query 71157 AGACAATACTCTACGAGTGTAAATATTACTGGTATACGGTTCCACTGACTCATTATTTCC 71216 ||| || || | | ||||| |||||| ||||| ||||| | || |||||||| || Sbjct 3931 AGATAAAACACGCCTGGTGTATATATTAGAAGTATAAGGTTCAAAGGATTCATTATTCCC 3990 Query 71217 CAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAGACTATTTCTAAGACC 71276 | ||||||||| |||||||| || ||||| || || || | || | ||||| | || Sbjct 3991 AAGAATTTGAGCTGTTGATGCTGTAGGCATGGGAGCAACAAGTAAAGAATTTCGTATGCC 4050 Query 71277 ATGTGATCGGATTTTATCTTTTAGAGATTCCCAATTCCAAAGATCCGATGGTACAACNNN 71336 || | | ||| | || |||| || | ||||| ||| | | | ||| ||| Sbjct 4051 ATACTTTTGAATTCTCTCCTTTAAAGCATTCCAATCCCACAAGTTTGTTGGCGTAACATT 4110 Query 71337 NNNNNNNNNNNNNNNNNNNATGCCGTTACTAGCGTATGAT--CCTGCATATGTATCGTAT 71394 ||||| || || | | || ||| |||||| || || Sbjct 4111 CCACATGTCGTATTGTAATATGCCTTTGCTTAC--AGGACTCCCTTCATATGATTCATAA 4168 Query 71395 GGTCCTTCTTTTTCGGCTAGTTCACAACTCGCCTCTAATGCTCCATAATAAATGGTTTCG 71454 || || ||| |||| |||||| || ||||||||||||||||| || || ||||| Sbjct 4169 GGACCGAACACTTCCGCTAATTCACAGCTTGCCTCTAATGCTCCATAGTAGATTGTTTCA 4228 Query 71455 AAAATCTTCTTATTGAGATCTTGTGCTTCCGGGCTATCAAATGGATAATTTAAGAGAATA 71514 || || | |||| || | ||||| | ||| ||| |||||||| | || ||| Sbjct 4229 AATATTTGTATATTTAGCAAATATGCTTGCTCGCTTTCATATGGATAACGCATCAGTATA 4288 Query 71515 AACGCGTCTGCTAATCCTTGAACGCCAATACCGATAGGTCTGTGTCTCTTATTAGAAATT 71574 | || ||||| || || ||||| ||||| || || |||| || ||| ||||||| | Sbjct 4289 AGTGCATCTGCAAAACCCTGAACTCCAATTCCTATGGGTCGATGCCTCATATTAGATTTC 4348 Query 71575 TCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTCTGACTATT 71634 | ||||| |||| |||||||||||| |||||||| |||||||| | |||| | || Sbjct 4349 TTGGCTTCAGGAAGAGGATAATAATTTATATCTATGATTTTATTCAAATTTTTTG-TAAC 4407 Query 71635 ACTTTGACC-ACATCCTTTAGTTTGAGAAAATCAAATCTCCCATCTATTACAAA----CA 71689 | ||| | || || || || || |||||||| | | || || | ||| || Sbjct 4408 AGTTTTAGTTACTTCTTTAAGCTTTTGAAAATCATAAGACTTAT-TAGCAGAAATGAACA 4466 Query 71690 CGTTCAAGGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCGGCATATTGTA 71749 ||| | |||| |||||| ||||| |||||||||| ||||| | | | ||||| | Sbjct 4467 TGTTAAGAGCAATAGATGCTAGATTGCAAACGGCTATCTCATCTGGCGCTGAATATTCGA 4526 Query 71750 TAATTTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTT 71809 ||||||||| || | ||| || || |||||||| || | ||||| ||||||||| ||| Sbjct 4527 CAATTTCAGTACACAAATTGCTGCATTTGATGGTACCAATATTTTTTTGATTACTTTTTC 4586 Query 71810 TGTTACACGCATCCTTATAAAGAATAAACGGAGTACCAGTTTCAATCTGAGATTCTATAA 71869 ||||||| | ||||||||| | ||| |||| || || ||||| | || | ||| || | Sbjct 4587 TGTTACAAGAATCCTTATACAACATATACGGTGTTCCTGTTTCTACTTGGGCTTCAATGA 4646 Query 71870 TCGCTTTCCAGAC-GACTCGAGCCTTTATTATATTCTTGTATCTCTTTTCTCTTTCGTAT 71928 | || ||| | |||| |||| || ||| | | ||| | | |||| |||| ||| Sbjct 4647 TAGCAAACCAAAGTGACT-GAGCTTTAATTTTCCTATTGAAACGGCCTTCTTTTTCATAT 4705 Query 71929 TGTGTATATAATCGTTCGAACTCGTCTCCCCAAGCATTGTCTAATCCAGGACATTCATTC 71988 | | |||||| ||| || || ||||||||| | | || | || ||||||| | Sbjct 4706 TTTTCATATAACTCTTCAAATTCTTCTCCCCAAACTTCATCAAGCCCTGGACATTTGTGG 4765 Query 71989 GGACACATCAATGACCACTCTCCATCATCATTTACTCGTTTCATAAAGAGATCAGGAATC 72048 |||||||| | |||||| || |||||| | ||| ||| |||| || |||||||||||| Sbjct 4766 GGACACATAAGTGACCAGTCGCCATCAGATTCTACGCGTCTCATGAACAGATCAGGAATC 4825 Query 72049 CAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGA 72108 || || || ||||| ||||| | ||| || ||||| ||||||||||| ||||| | Sbjct 4826 CAGAGGGCGTAAAATAAGTCTCTTGCTCTGTGTTCCTCTTTTCCTGTATTTTTTTTTAAG 4885 Query 72109 TCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGC 72168 || | ||| | | |||||| |||||||| || || |||||||| || | | || ||| Sbjct 4886 TCTAAAAACTCGAAAATATCCGAATGCCAAGGCTCTAAGTATATAGCAAACGCACCAGGC 4945 Query 72169 CGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGA 72228 | ||| || ||||| |||| || | || ||||| | || || ||||| || Sbjct 4946 CTTTTTCCGCCACCCTGGTCTACATAACGTGCTACATTATTGAACACCCTTAACATAGGC 5005 Query 72229 ATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAAT--AT 72286 | | ||||| |||| ||||| || ||| | || | |||| | || ||||| | Sbjct 5006 ACTAAGCCATTAGATGTGCCATTAGTGCCGCATATTGATGTTCCTTTAGCTCGAATACAA 5065 Query 72287 TGCTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACG 72346 || ||| || || ||||| || || |||||| || | ||| || ||| | | Sbjct 5066 TGAACATT--TATTCCAATTCCTCCCGCTGATTTAGAAATCATTGCACACTGTTCAACTG 5123 Query 72347 TATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTT 72406 | | | || || || || ||| | | ||| |||| | |||||| || | | Sbjct 5124 ATTTAAAAATTCCTTCAATTGAATCTGCTACCATTGTAAGCAAAAAACAAGATGATAACT 5183 Query 72407 GGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAG 72466 | | || || ||| | || |||||| || ||||| || || ||||| |||| |||| Sbjct 5184 GAGGGCGTCTTGTTGCAGCCGCAAATAAAGTTGGAGAGGCATGGGTAAAATATTTCTCAG 5243 Query 72467 ACAGTAGATTGTACGTCTCAATAGCTGATTCTATATCCCATTGATGTATTCCTACCGCGA 72526 | || | |||||| || ||||| || | || ||||| ||||||||| | || | Sbjct 5244 AGAGCAAATTGTATGTTTCAATTGCAGCATCGATATCTTCACCATGTATTCCAATCGATA 5303 Query 72527 CACGCATTAACATATGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAGG 72586 | | ||| ||||| ||||| ||||| || || | || || | ||| | ||| || | Sbjct 5304 CTCTCATCAACATGTGCTGTGGTCTCTCCACAACTTTACCTTTAACTTTAAGCAAATATG 5363 Query 72587 ATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAA 72646 | ||| | ||| ||||| ||||| || |||||| |||||| || || || || || Sbjct 5364 AACGTTCAAGAGTCTTAAAGCCAAAGTAATTGTATCCAAAGTCGCGGTCATATATGATTG 5423 Query 72647 CCGAATT 72653 ||||||| Sbjct 5424 CCGAATT 5430 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 670623815429840