Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ephydra_20gracilis_20[genbank_20GCA_5F001014675.1_202015-05-28] 61,434 sequences; 410,872,512 total letters Query= NC_005336.1 Length=139962 Score E Sequences producing significant alignments: (Bits) Value seq17122 86.0 6e-12 >seq17122 Length=8340 Score = 86.0 bits (94), Expect = 6e-12 Identities = 85/110 (77%), Gaps = 0/110 (0%) Strand=Plus/Minus Query 5381 TTAAACAGCACCACCCCGACATTGCCTCGGTAGTCTTCGTCGATAACGCCAGCGCCCACG 5440 || ||||| || || || | |||||| || ||||||||||||| ||||||||| || || Sbjct 2234 TTGAACAGTACAACGCCTAAATTGCCGCGATAGTCTTCGTCGACAACGCCAGCACCGACA 2175 Query 5441 TCGATAAAGTGTTTGACCGCAAGGCCGGAACGTGGTGCTATGCGTCCGTA 5490 ||||| || | ||||| || || || || ||||| || || || ||||| Sbjct 2174 TCGATGAAATTCTTGACAGCCAGTCCTGAGCGTGGCGCAATACGACCGTA 2125 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 447406561274080