Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ephydra_20gracilis_20[genbank_20GCA_5F001014675.1_202015-05-28] 61,434 sequences; 410,872,512 total letters Query= NC_005905.1 Length=86462 Score E Sequences producing significant alignments: (Bits) Value seq4266 114 7e-21 >seq4266 Length=45855 Score = 114 bits (126), Expect = 7e-21 Identities = 191/274 (70%), Gaps = 4/274 (1%) Strand=Plus/Minus Query 3873 AAGGTGTACATTTTATGATGGCTGACGGTGGGTTCTCGGTTGAGGGTCAAGAAAATATGC 3932 ||||||| |||||| | ||||| || || |||||||| || || || |||||||| || | Sbjct 8276 AAGGTGTCCATTTTGTTATGGCGGATGGAGGGTTCTCCGTCGAAGGACAAGAAAACATAC 8217 Query 3933 AAGAAATGTTATCGAAAAAGATGTATTTGTGTCAATGTTTAATTGCATTGATGATCATAC 3992 | ||||| | || ||| | | || || || || | ||||| ||||||| || ||| Sbjct 8216 AGGAAATACTTTCTAAACAACTTTACTTATGCCAGTTTTTAACCGCATTGAAAATTCTAC 8157 Query 3993 GAATTGGTGGTCATTGTGTTATCAAATTTTTCGATATATTTACACCTTTTAGTGCTGGTT 4052 ||| || || |||| || ||||| || ||||| ||||| || |||| || Sbjct 8156 GAACAGGAGGGCATTTCATTTGTAAATTATTTGATATTTTTACGAGGTTCAGTGTCGGAC 8097 Query 4053 TAGTGTATTTGATGTATAGATCTTTTAATCGTATTTG--TATTTTCAAACCACATTCATC 4110 | | | ||| ||||||| | ||||| || | || |||| | |||||| || Sbjct 8096 TCATTTTTTTAATGTATAACTGTTTTA--CGGAAATGACTATTATAAAACCAAATAGTAG 8039 Query 4111 GCGACCGGCCAATTCTGAAAGATATTTGGTGTGT 4144 || || || || ||||||||||||||||| ||| Sbjct 8038 CCGGCCAGCTAACTCTGAAAGATATTTGGTTTGT 8005 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 276346536887302