Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ephydra_20gracilis_20[genbank_20GCA_5F001014675.1_202015-05-28] 61,434 sequences; 410,872,512 total letters Query= NC_005906.1 Length=81755 Score E Sequences producing significant alignments: (Bits) Value seq1616 114 7e-21 seq31156 113 2e-20 seq22040 109 3e-19 >seq1616 Length=14953 Score = 114 bits (126), Expect = 7e-21 Identities = 77/87 (89%), Gaps = 0/87 (0%) Strand=Plus/Plus Query 11444 AAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGAC 11503 ||||||| | ||||||||| |||||||||| |||||||||||||||||||||||| Sbjct 12915 AAAAAATAAGCATGGCCCATGGGGGGATCGAACCCACGACCTTCGCGTTATTAGCACGAC 12974 Query 11504 GCTCTRACCAACTGAGCTAATGGGCCG 11530 ||||| ||||||||||||||||||||| Sbjct 12975 GCTCTAACCAACTGAGCTAATGGGCCG 13001 >seq31156 Length=3549 Score = 113 bits (124), Expect = 2e-20 Identities = 78/88 (89%), Gaps = 1/88 (1%) Strand=Plus/Plus Query 11443 TAAAAAATCAA-ATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACG 11501 |||||||| | | ||||||||| |||||||||| |||||||||||||||||||||| Sbjct 1397 TAAAAAATTAGGAGTGGCCCATGGGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACG 1456 Query 11502 ACGCTCTRACCAACTGAGCTAATGGGCC 11529 ||||||| |||||||||||||||||||| Sbjct 1457 ACGCTCTAACCAACTGAGCTAATGGGCC 1484 Score = 100 bits (110), Expect = 1e-16 Identities = 59/62 (95%), Gaps = 0/62 (0%) Strand=Plus/Plus Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527 |||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 125 GGATCGAACCCGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAACTGAGCTAATGGG 184 Query 11528 CC 11529 || Sbjct 185 CC 186 >seq22040 Length=2584 Score = 109 bits (120), Expect = 3e-19 Identities = 68/74 (92%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515 ||||||||| |||||||||| ||||||||||||||||||||||||||||| |||||| Sbjct 1517 TGGCCCATGGGGGGATCGAACCCACGACCTTCGCGTTATTAGCACGACGCTCTAACCAAC 1576 Query 11516 TGAGCTAATGGGCC 11529 |||||||||||||| Sbjct 1577 TGAGCTAATGGGCC 1590 Lambda K H 0.639 0.410 0.921 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 261295414510984