Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ephydra_20gracilis_20[genbank_20GCA_5F001014675.1_202015-05-28] 61,434 sequences; 410,872,512 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq32255 98.7 9e-16 seq10185 87.8 2e-12 seq4449 87.8 2e-12 >seq32255 Length=22131 Score = 98.7 bits (108), Expect = 9e-16 Identities = 122/167 (73%), Gaps = 0/167 (0%) Strand=Plus/Plus Query 71717 GAGGGTAAAATTCACGGATACCTACGCATGTACTGGGCCAAAAAGATTCTCGAGTGGACT 71776 ||||| ||||| ||||| | | |||||||| ||||| || ||||||||||| ||||| Sbjct 3548 GAGGGCAAAATGCACGGGTTTTTGCGCATGTATTGGGCGAAGAAGATTCTCGAATGGACA 3607 Query 71777 CAAACTCCCGAGCAGGCGCTCGAGTATTCTATTTATCTAAACGATAGATACAGTCTCGAC 71836 || | || || ||||| || ||||| | |||| | || || | ||| || | || Sbjct 3608 GAATCGCCGGAACAGGCACTGGAGTACGCCATTTTGTTGAATGACAAATATAGCTTAGAT 3667 Query 71837 GGTCGCGATCCTAACGGTTATGTCGGTTGCATGTGGAGCATTTGCGG 71883 || |||||||| | || ||||| || || |||||| |||| |||| Sbjct 3668 GGACGCGATCCAAGTGGCTATGTTGGCTGTATGTGGTCCATTGGCGG 3714 >seq10185 Length=35228 Score = 87.8 bits (96), Expect = 2e-12 Identities = 153/220 (70%), Gaps = 2/220 (1%) Strand=Plus/Minus Query 26762 AAACAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGA 26821 ||||||||||||| | ||||||||||| | || || ||| | || ||| | || |||| Sbjct 2772 AAACAAAATGCAAATCTTTGTAAAAACTCTTACCGGGAAAACTATTACCTTGGAGGTAGA 2713 Query 26822 ATCAAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCC 26881 | | || || |||||| | || ||| || ||| || |||||||| || || || Sbjct 2712 ACCTTCGGATACTATCGAGAATGTAAAAGCTAAAATTCAAGATAAAGAAGGTATTCCACC 2653 Query 26882 CGATCAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGC-G 26940 ||||| ||| | | |||| | || || ||| | ||||||| | || | | | | Sbjct 2652 AGATCAGCAACGTTTGATTTTTGCTGGTAAGCAATTGGAAGATG-GACGCACATTATCTG 2594 Query 26941 ACTATAACATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980 ||||||| || || ||||| || || | |||||||| || Sbjct 2593 ACTATAATATCCAGAAAGAGTCAACACTTCATCTGGTGCT 2554 >seq4449 Length=67262 Score = 87.8 bits (96), Expect = 2e-12 Identities = 149/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 26762 AAACAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGA 26821 |||||| ||||| | || || || || |||| || ||| | ||||| | || | || Sbjct 64274 AAACAACATGCAGATCTTCGTTAAGACCCTAACGGGCAAAACCATCACTCTTGAGGTTGA 64333 Query 26822 ATCAAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCC 26881 | || || ||||| | |||||| |||||| |||||||| || || ||||| Sbjct 64334 GCCCTCTGATACTATCGAAAATGTCAAAGCCAAGATTCAGGACAAAGAGGGAATTCCTCC 64393 Query 26882 CGATCAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGA 26941 |||||||| | | || | | |||||||| || ||||||| | | | || || Sbjct 64394 AGATCAACAGCGTTTGATATTTGCTGGCAAACAGCTGGAAGATGGCCGCACCCTCTCTGA 64453 Query 26942 CTATAACATTCAAAAAGAATCTACTATCCATCTGGT 26977 ||| || || ||||||||||||||| | ||| |||| Sbjct 64454 CTACAATATCCAAAAAGAATCTACTTTGCATTTGGT 64489 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478294823176480