Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ephydra_20gracilis_20[genbank_20GCA_5F001014675.1_202015-05-28] 61,434 sequences; 410,872,512 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq37138 192 2e-43 >seq37138 Length=11844 Score = 192 bits (212), Expect = 2e-43 Identities = 1098/1736 (63%), Gaps = 41/1736 (2%) Strand=Plus/Minus Query 363443 TTGTTGAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATG 363502 |||| || | || ||||| ||||| ||| | || | ||||| || ||| | ||| Sbjct 5336 TTGTGGAGAGACCACAGCACATGTTGATGAGAGTATCGATTGGAATACATGGTGAAGATA 5277 Query 363503 TTGATGCCGCGATTGAAACATATAA---GCT-TCTAAGTGCTCGTGTATTCACGCACGCC 363558 | ||||| || ||||||||||| || ||| ||| || | | || | || ||| Sbjct 5276 TCGATGCTGCAATTGAAACATACAATTTGCTCTCTGAGAAATATTTTA----CCCATGCC 5221 Query 363559 ACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTA 363618 | ||||| | | |||| ||| | || ||| | || ||||| ||| | || Sbjct 5220 TCTCCAACTTTATTTGCGGCTGCAACAAGACGCCCTCAGTTATCATCTTGTTTTTTGCTT 5161 Query 363619 AAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATT 363678 | |||| | ||||| || || || || ||| | || || | | ||||| | ||| Sbjct 5160 ACAATGGTAGCAGATTCAATTGAAGGAATTTTTAAATCAGTTGAACAGTGTGCAATGATT 5101 Query 363679 TCCAAGAATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGCACA--GAACAGTT 363736 || || || || |||||||| || | || | |||| || | ||||| Sbjct 5100 TCTAAATCAGCGGGAGGAATTGGAATAAATGTTCATTGTATTCGAGCTAAAGGAACATCA 5041 Query 363737 ACATTCGCGGCAC-AGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGAC 363795 | || ||||||| | || | | || ||||| | || || ||| | | ||||| | Sbjct 5040 ATAT--GCGGCACTAATGGCACA-TCTAATGGCTTAGTGCCTATGTTAAGGGTGTTCAAT 4984 Query 363796 AATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTAT 363855 ||| || | || || ||||||||||| ||||| | || ||||||||||| || Sbjct 4983 AATGTAGCACGTTATGTAGACCAGGGTGGCGGAAAAAGGCCTGGTGCGTTTGCTATATAC 4924 Query 363856 CTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAA 363915 | |||||| ||| | |||||||| |||||| | || | ||||| || |||||| Sbjct 4923 TTAGAGCCTTGGCATTCGGATATTTTCGAGTTTTTAGACTTAAAAAAAAATACAGGAAAA 4864 Query 363916 GAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAG 363975 |||||| | ||| | || | || || || || ||| || |||| | || |||| Sbjct 4863 GAGGAACACAGAGCAAGAGACTTATTTTACGCCCTCTGGATTCCTGATCTGTTCATGAGA 4804 Query 363976 CGCGTGGAGGCAGGTAAGAATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCC 364035 ||||| || | | | | |||||||| | || || ||| |||||||||| ||| Sbjct 4803 CGCGTAGAATCTGATGGCGACTGGTCACTTATGTGTCCCCACAAATGTCCAGGGCTTGAT 4744 Query 364036 GATGTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGCT 364095 || || ||||| || || | || | |||| ||||| |||||| || || | | Sbjct 4743 GAAGTTTGGGGAGAAGAATTTGAAGAGTTATATGAAAAATATGAAAAAGAAGG-CCGTTT 4685 Query 364096 C-GTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGAC 364154 | || || |||| || ||| || |||||||| ||||| || | || | || || Sbjct 4684 CAATAGGAAAATTAAAGCTCAGTCACTTTGGTTTGCTATCATTGAAGCCCAAGTAGAAAC 4625 Query 364155 AGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCT 364214 ||||||||| ||||||||||| || ||||| || ||| | || || || | | | Sbjct 4624 AGGAACACCGTATATGTTGTATAAGGATTCTTGTAACAGAAAAAGTAATCAAAAAAATAT 4565 Query 364215 TGGTACAATTCAGCAGAGCAACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGA 364274 |||||| || | ||||| | ||||| || ||| | ||||| | || || || || Sbjct 4564 TGGTACCATCAAATGCAGCAATTTGTGTACTGAAATTGTCGAATATTCAGCGCCAGATGA 4505 Query 364275 GACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGTAAAAGATGGTA---C 364331 || ||||| || || || || || || || ||| ||| | | | || | Sbjct 4504 GATAGCCGTTTGCAATCTAGCATCTATTGCTCTTAACATGTTCATTTCTGCTAATAAGTC 4445 Query 364332 TTTTGACCACCAGCATCTTTATGACGTAACCTATCATGCTACTTGCAATCTCGACAAGGT 364391 || ||| || | ||| | || ||||| | || ||| ||| | | || | Sbjct 4444 TTATGATTTTCAAAAGCTTAAAGAAGTAACTAAAACTGTTACAAAAAATTTGAATAAAAT 4385 Query 364392 TATCGACAAGAATTATTATCCAATTCCTGAAGCCGAGCGTTCTAATATGCGTCATCGCCC 364451 || || | ||||||||||| ||||||||||| || ||||||||| | ||||| || Sbjct 4384 CATAGATATAAATTATTATCCTCTTCCTGAAGCCAAGAAATCTAATATGAGGCATCGACC 4325 Query 364452 GATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGATGCT-CAAGATGGCATTTG 364510 || || |||| || ||||| | || || | |||| || | | || ||| || Sbjct 4324 CATAGGAATTGGAGTTCAGGGTTTTGCAGATGCACTTATACTGATGCGTTAT-CCATATG 4266 Query 364511 ATTCGCCTG-ACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACAATGTATTTTGCCGCA 364569 | || | | || | | ||||||| | || ||||||||||| || | || ||| Sbjct 4265 A-AAGCGAGCAAGCATATTTGCTAAATATACAAATATTTGAAACAATCTACTATGGAGCA 4207 Query 364570 ATGACTGCTTCGTGTGATTTGGCAAAAACCAAGGGAAAGTACTCTACTTATGAGGGGTCC 364629 | || ||||| || || || || || | ||||| ||| Sbjct 4206 TTAGAGGCAAGCTGTGAATTAGCGGAAGTGTTCGGTCCTTATGAATCATATGAAGGGAGT 4147 Query 364630 CCTCTTTCGCAGGGAAAATTCCAGTTTGATCTATGGAATGTCACGCCATCTGTCCGATGG 364689 ||| | | || | ||| || | || | |||||||| |||||| | | ||| Sbjct 4146 CCTGTAAGCAAAGGCATATTACAATACGACATGTGGAATGTTACGCCAACAAACTTGTGG 4087 Query 364690 AACTGGGATACGCTACGTTCCAACGTTAAGAAGCATGGTACTCGCAACTCCCTCGTTACA 364749 | ||| || | || | || | ||| |||| | || || || | || Sbjct 4086 GATTGGAATGCTTTAAAGGAGAGAATTCAAAAGTATGGCATACGAAATTCTTTACTTGTT 4027 Query 364750 GCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAACGAGTGCTTCGAACCG 364809 || |||||||| || || || || || || || || || || || || | ||| ||||| Sbjct 4026 GCTCCCATGCCTACAGCATCAACAGCTCAAATTCTTGGGAATAATGAATCCTTTGAACCT 3967 Query 364810 TTTACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTTCCGGTAGTTAATAAG 364869 | ||| ||| | || | | || ||| | || || ||||| | || |||||| | Sbjct 3966 TATACTTCTAATATATACACCAGGCGTGTTTTATCTGGTGAATTCCAAGTTGTTAATCAT 3907 Query 364870 TACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACAGCATGAA-----GAACT 364924 |||| ||| ||||| |||| | | | |||| ||||| |||||| || | Sbjct 3906 CACCTTCTCAGAGATCTAACCGAACTTGAATTATGGGATGACAACATGAAAAATCAAATT 3847 Query 364925 ATATCATCGCCGCTAATGGTTCTGTGCAGAACATTCCAGGATTTCC--AGAAGATCTGAA 364982 |||||| |||| ||||||| | || || || | |||| || || | Sbjct 3846 ATATCA-AGCCG----TGGTTCTATACAAAATATAGAAACTATTCCTAAGTCCAT-TCGT 3793 Query 364983 GCCTATTTACAAAACCGTATGGGAAATTTCCATGCGAACTCTCATTGATATGGCGGCCGA 365042 | || | ||||| || || ||||||||||| | | | ||| | ||||| || || Sbjct 3792 GACT-TATACAAGACAGTTTGGGAAATTTCAGTTAAATCGACAATTAAAATGGCAGCTGA 3734 Query 365043 TCGCGGTGCTTTTATCTGTCAGAGCCAGTCGTTTAACGTATTCATGACTCAG--CCAACC 365100 | | || |||||||| ||| || ||||| |||||| ||||| | ||| || | | Sbjct 3733 TAGAGGAGCTTTTATTGATCAAAGTCAGTCTTTTAAC--ATTCACGTTGCAGAACCCAAC 3676 Query 365101 TCCGCCAAGCTTACATCCATGCATTTCTACGGGTGGAAATCCGGTCTTAAGACAGG 365156 | | ||| | ||||| || |||||||||| |||||||| || ||||| || || Sbjct 3675 TATGGAAAGTTAACATCAATTCATTTCTACGCTTGGAAATCTGGCCTTAAAACTGG 3620 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1302327700241388