Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ephydra_20gracilis_20[genbank_20GCA_5F001014675.1_202015-05-28] 61,434 sequences; 410,872,512 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq4449 102 7e-17 seq10185 89.7 4e-13 >seq4449 Length=67262 Score = 102 bits (112), Expect = 7e-17 Identities = 154/219 (70%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 23984 AAACAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGA 24043 |||||| ||||| | || || || || |||| || ||| | || || | || || || Sbjct 64274 AAACAACATGCAGATCTTCGTTAAGACCCTAACGGGCAAAACCATCACTCTTGAGGTTGA 64333 Query 24044 GGCCAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCC 24103 | || || || ||||| | |||||| |||||| |||||||| || || ||||| Sbjct 64334 GCCCTCTGATACTATCGAAAATGTCAAAGCCAAGATTCAGGACAAAGAGGGAATTCCTCC 64393 Query 24104 CGATCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGA 24163 ||||||||| | |||| | | ||||| || || ||||||| | | | | || || Sbjct 64394 AGATCAACAGCGTTTGATATTTGCTGGCAAACAGCTGGAAGATGGCCGCACCCTCTCTGA 64453 Query 24164 TTATAACATTCAAAAAGAATCTACAATTCATTTAGTGTT 24202 || || || |||||||||||||| | ||||| ||||| Sbjct 64454 CTACAATATCCAAAAAGAATCTACTTTGCATTTGGTGTT 64492 >seq10185 Length=35228 Score = 89.7 bits (98), Expect = 4e-13 Identities = 152/218 (70%), Gaps = 2/218 (1%) Strand=Plus/Minus Query 23984 AAACAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGA 24043 ||||||||||||| | ||||||||||| | || || ||| | |||||| | || || || Sbjct 2772 AAACAAAATGCAAATCTTTGTAAAAACTCTTACCGGGAAAACTATTACCTTGGAGGTAGA 2713 Query 24044 GGCCAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCC 24103 | || || |||||| | || ||| || ||| || |||||||| || || || Sbjct 2712 ACCTTCGGATACTATCGAGAATGTAAAAGCTAAAATTCAAGATAAAGAAGGTATTCCACC 2653 Query 24104 CGATCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGC-G 24162 ||||| || | |||||| | || |||||| | ||||||| | || | | | | Sbjct 2652 AGATCAGCAACGTTTGATTTTTGCTGGTAAGCAATTGGAAGATG-GACGCACATTATCTG 2594 Query 24163 ATTATAACATTCAAAAAGAATCTACAATTCATTTAGTG 24200 | ||||| || || ||||| || ||| ||||| | ||| Sbjct 2593 ACTATAATATCCAGAAAGAGTCAACACTTCATCTGGTG 2556 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429614095362270