Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ephydra_20gracilis_20[genbank_20GCA_5F001014675.1_202015-05-28] 61,434 sequences; 410,872,512 total letters Query= NC_007767.1 Length=132959 Score E Sequences producing significant alignments: (Bits) Value seq10185 86.0 5e-12 seq56942 82.4 6e-11 >seq10185 Length=35228 Score = 86.0 bits (94), Expect = 5e-12 Identities = 158/232 (68%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 115283 AAAATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCC 115342 ||||||||||| ||||| ||||| || || || ||||| |||||| | || || | Sbjct 2768 AAAATGCAAATCTTTGTAAAAACTCTTACCGGGAAAACTATTACCTTGGAGGTAGAACCT 2709 Query 115343 AGCGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGAT 115402 || ||| | | | |||||| |||||| ||||||||||| | || ||| Sbjct 2708 TCGGATACTATCGAGAATGTAAAAGCTAAAATTCAAGATAAAGAAGGTATTCCACCAGAT 2649 Query 115403 CAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTAT 115462 |||||| | | |||| ||| || || ||||| ||||||| || | | || ||| Sbjct 2648 CAGCAACGTTTGATTTTTGCTGGTAAGCAATTGGAAGATGGACGCACATTATCTGACTAT 2589 Query 115463 AACATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGGAA 115514 || || || |||||||| || | ||| ||||| | | || || || |||| Sbjct 2588 AATATCCAGAAAGAGTCAACACTTCATCTGGTGCTCCGCTTACGTGGTGGAA 2537 >seq56942 Length=2534 Score = 82.4 bits (90), Expect = 6e-11 Identities = 159/232 (69%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 115282 AAAAATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTC 115341 |||||||||||| ||||| |||||||| || || || || ||||| | ||| || | Sbjct 50 AAAAATGCAAATCTTTGTGAAAACGCTGACTGGTAAGACGATTACGCTGGAAGTTGA-AC 108 Query 115342 CAGC-GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTG 115400 || | ||||| ||| | || ||| |||||| |||||||| || | || | Sbjct 109 CATCGGACACGATTGAGAATGTCAAAGCGAAAATTCAAGATAAAGAGGGTATACCGCCAG 168 Query 115401 ATCAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATT 115460 |||||||| | || || | || |||||||| | ||||||| || || |||| | Sbjct 169 ATCAGCAACGTCTGATCTTCGCTGGCAAACAGCTCGAAGATGGACGCACATTGTCCGACT 228 Query 115461 ATAACATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512 | ||||| ||||| || || || | || |||| ||| | |||| || || Sbjct 229 ACAACATACAAAAGGAATCGACGCTTCACTTGGTTTTGCGTCTGCGTGGCGG 280 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425025533516080