Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ephydra_20gracilis_20[genbank_20GCA_5F001014675.1_202015-05-28] 61,434 sequences; 410,872,512 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq27183 116 3e-21 >seq27183 Length=12736 Score = 116 bits (128), Expect = 3e-21 Identities = 181/259 (70%), Gaps = 0/259 (0%) Strand=Plus/Plus Query 20187 TTTTGTAGATGTGGGCATCTCCCAACGTGTGAATAAACTCCCCGGGTCTAAGACCAGTAA 20246 ||||||||| ||| | ||| || | ||||| | ||| || ||||| | | || || | Sbjct 6303 TTTTGTAGACGTGCGTATCGCCGAGGGTGTGCACAAAGTCGCCGGGCTTCAAGCCTGTGA 6362 Query 20247 CATGAGCAAGCATATAAGTTAAGAGGGAATAGCTGGCAATGTTAAAAGGAACTCCCAAAC 20306 || || | |||||| ||||| || | ||| |||||| || || || || ||||||| Sbjct 6363 TGTGCGCTATCATATATGTTAATAGCGCATAAGAGGCAATATTGAAGGGCACGCCCAAAC 6422 Query 20307 CCATGTCTCCCGACCTCTGATACAGCTGACAGGAAAGCTCACCGTCAGCTACATAAAATT 20366 |||| || | | |||||||| |||||| || |||||||| | || ||| | |||| Sbjct 6423 CCATATCGGCGCTGCGCTGATACAACTGACACGATAGCTCACCATTAGACACAAAGAATT 6482 Query 20367 GACATAACAAGTGACAGGGCGGAAGCGCCATCAACGACAAGTCCGCCGGGTTCCACGCAC 20426 | ||| ||||||| ||||| | |||||| || | || | || ||||| || Sbjct 6483 GTGCTAAACAGTGACATGGCGGCAACGCCATTTGCGGTATATCAACAGGATTCCAAGCGG 6542 Query 20427 ACATAATGATTCTTCTATC 20445 ||||||| || | || ||| Sbjct 6543 ACATAATAATGCGTCGATC 6561 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 441033858792560