Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ephydra_20gracilis_20[genbank_20GCA_5F001014675.1_202015-05-28] 61,434 sequences; 410,872,512 total letters Query= NC_012743.2 Length=62715 Score E Sequences producing significant alignments: (Bits) Value seq10744 381 2e-101 seq19899 246 1e-60 seq46863 111 6e-20 >seq10744 Length=4730 Score = 381 bits (422), Expect = 2e-101 Identities = 541/764 (71%), Gaps = 0/764 (0%) Strand=Plus/Plus Query 22013 TCGATGCAGCTCGTCGTGACGTCGCCGCCCTACAACATCGGCAAGAAGTACGAAAAGCGG 22072 || ||| ||||| |||| ||||| ||||||||||| || |||||| || |||||||| Sbjct 461 TCTATGAAGCTCATCGTCACGTCACCGCCCTACAATATTGGCAAGTCTTATGAAAAGCGC 520 Query 22073 TCGCCGCTGGACGCCTACGTGCAGGCNNNNNNNNNNGTCATCTCCGAGTGCGTGCGGCTT 22132 |||||||| || ||||| ||| || ||||| || ||||| || || Sbjct 521 TCGCCGCTCGATCAATACGTTAAGGATCAGGCGCAAGTGATCTCGGAATGCGTTCGACTC 580 Query 22133 CTCAGCCCGCGCGGCTCGCTCTGCTGGCAGGTCGGCAATCACGTGCAGAAGGGCGAGATA 22192 | ||| ||| || || |||||||| || || ||||| || | |||||||| ||| Sbjct 581 TTGCACCCAAACGGATCTCTTTGCTGGCAAGTGGGTAATCATGTCGATAAGGGCGAAATA 640 Query 22193 TTCCCGCTCGACACCGTGCTCTATCCGGTCTTTCGCGAGCACGGCCTGAAGCTACGGAAT 22252 ||||| | || ||||| |||| | ||| || || || ||||||| | ||| Sbjct 641 TTCCCCTTAGATCTTGTGCTGTATCATCTTTTTAAAGATCATGGTTTGAAGCTTAGAAAT 700 Query 22253 CGCGTGGTGTGGCATTTCGAGCACGGCCTGCATTGCTCCAATCGCCTGTCCGGCCGCTAC 22312 || | | ||||| || || ||||| |||||||| ||| ||| |||| || ||||| Sbjct 701 CGGATCATCTGGCACTTTGAACACGGTTTGCATTGCAGCAAGCGCATGTCAGGGCGCTAT 760 Query 22313 GAGACGATTTTGTGGTTCACGAAGGGCGACGACTACGTATTCAACCTCGACCCGATCCGG 22372 ||||| || |||||||||| |||||||| |||||| ||| | || || |||||||| Sbjct 761 GAGACTATCATGTGGTTCACCAAGGGCGATGACTACACTTTCCATCTGGATCCGATCCGC 820 Query 22373 GTTCCGTCGAAATACCCCGGCAAGAAATACTTCAAGGGGCCGAAAGCCGGTCAGCTCTCC 22432 || ||||| || || || || || || | ||| || || ||||| || ||||| || Sbjct 821 GTCCCGTCTAAGTATCCTCAAAAAAAGTATTACAAAGGCCCAAAAGCAGGACAGCTTTCG 880 Query 22433 TGCAATCCGCTGGGGAAAAACCCCGGCGATGTGTGGGTTTTCCCCAACGTCAAGAACAAT 22492 | ||||| || || ||||| ||| ||||||| |||||||| |||||||| |||||||| Sbjct 881 GGTAATCCACTTGGCAAAAATCCCAGCGATGTTTGGGTTTTTCCCAACGTGAAGAACAAC 940 Query 22493 CACGTCGAAAAGACCGACCACCCGTGCCAATTCCCGGTGGAGCTGGTCGAACGGCTCGTG 22552 || || || || ||| || || ||||| || || | ||| ||||||| || || || Sbjct 941 CATGTTGAGAAAACCATTCATCCCTGCCAGTTTCCTATTGAGTTGGTCGAGCGTCTTGTT 1000 Query 22553 CTGTCGCTGACCAACCCCGGCGACGCGGTGTTCGATCCGTATATGGGCGTGGGGTCATCG 22612 ||||| ||||| | || ||| || || ||||| || ||||| || || || ||| Sbjct 1001 TTGTCGATGACCGATGAAGGGGACAGTGTTTTTGATCCTTACATGGGGGTCGGATCGTCG 1060 Query 22613 GTCGTCGCGGCCCTCAAGAACGATCGAGTCGGCTACGGCTGCGACGTCGTGAAGGAGTAC 22672 || || | || || ||| | | ||| || ||||| || ||||| ||||| ||||| Sbjct 1061 GTTGTTGGAGCGCTAAAGCATGGTCGTAAAGGTTACGGTTGTGACGTGGTGAAAGAGTAT 1120 Query 22673 GTCGAGGCCGCCTGGGAGCGCGTGCACCAGCTTCGAGCCGGCACACTCCAGACGCGCCCA 22732 ||||| | || ||| | ||||| || ||||| || | ||||| | || || ||||| Sbjct 1121 GTCGATGTTGCGTGGAAACGCGTTCATGAGCTTAGATCAGGCACGTTGCAAACCCGCCCG 1180 Query 22733 ATGCACAAGCCCGTCTATGACCCGACGCAGCCATACGGCGGGCA 22776 ||| | |||||||| ||||| || | | || | |||| || || Sbjct 1181 ATGGATAAGCCCGTTTATGATCCTAAGAAGAAAAACGGAGGCCA 1224 Score = 199 bits (220), Expect = 2e-46 Identities = 431/629 (69%), Gaps = 22/629 (3%) Strand=Plus/Plus Query 22848 GAGGCCCTTTGTGCGCATCGTCGAGCAGTATTCCCATCTCAACGGCCTCGAGTACCTGTT 22907 |||||| || |||| || || ||||| ||||| ||||| ||||| || ||||| | | Sbjct 1218 GAGGCCATTAATGCGAATAGTTGAGCATTATTCGCATCTTAACGGTCTTGAGTATTTAAT 1277 Query 22908 GGTACACAAGCCGACGCTCTGGACAGAGATTCAGGACGTAATCACGACGGTTGACGCATC 22967 ||| || ||||| | || ||| || |||||| | || || ||| || || || | Sbjct 1278 GGTGCATAAGCCAGCCCTGTGGGACGAAATTCAGCAGGTGATTGCGAAAGTCGATGCTAC 1337 Query 22968 -CATTTGCCGGACAAAACTGTCGAAGGAAAAG-CGATCCGAAGGCGAA-ATGCTCTACTC 23024 || || | || || | || || ||||| | || || | | ||||||||| | Sbjct 1338 GCAATT-CAAAACCAAGGTTTCCAAAGAAAAAACCAT--GACTGGTAGGATGCTCTACGC 1394 Query 23025 GCCCCGTGCGATGAACAAGGCCATTGACCAAGGCTTCGCTCAA-CACGGC-TGGGGCGAG 23082 |||| | |||||||||||| || || || || ||| | ||| | |||| || Sbjct 1395 GCCCATCGAGATGAACAAGGCGATGGATGCAGAGTT---TCAGGCGCGGGGTTGGGC-AG 1450 Query 23083 CGTC--GAATTTCGTATTGGGTCACGTCAGACGCGAAATTGATCCGCAAAACGCTTTTCA 23140 ||| ||| || |||||||| || || || || ||||||| ||||| | | Sbjct 1451 AGTCCAGAACGTCATATTGGGTGACAAAGGATGCAAACCTGATCCGAAAAACCATGACGA 1510 Query 23141 TGAGCCCCGAGCAGCAAAAGGCTGAGATC---GAAGGCGCGGGACAGAAGCCATTTTCGT 23197 || | | || |||| ||| |||||| || ||| | || | || | | | Sbjct 1511 TGGACGCGAAGGAGCAGAAGCAAGAGATCATTGATAGCG---GCCAAACACCTATATTTT 1567 Query 23198 CCTACAACCAAACCGACTTCGTGAAGGAGCGGGTCGCGGTAGAGGTCCAGTTCGGCAAGT 23257 | | ||| ||||| ||||| |||||||| || || ||||| ||||| ||||| || |||| Sbjct 1568 CATTCAATCAAACAGACTTTGTGAAGGATCGCGTTGCGGTGGAGGTTCAGTTTGGAAAGT 1627 Query 23258 ACGCGTTCGTGGCCTATGACCTGTTCGTGAAGCATCTGGCGTTCTACGTCGGCGACGTGA 23317 | |||||||| || | |||| ||||||| || || |||| || | |||||| ||||||| Sbjct 1628 ATGCGTTCGTTGCTTTTGACTTGTTCGTCAAACACATGGCATTTTTCGTCGGTGACGTGA 1687 Query 23318 TCGACGTCGGCGTGGAAATCCTGCCGATGAAGGAGCTCCA-GCAGCAGATGTCGTCGGGC 23376 ||||| | ||| | ||||| |||| ||||| ||||| || |||| | ||||| || ||| Sbjct 1688 TCGACCTGGGCATCGAAATTTTGCCCATGAAAGAGCTACAGGCAG-AAATGTCATCTGGC 1746 Query 23377 GTTGGCTACTACGAGGGCGAGCTGTACAACCTCATCCGCGAAGGGCGCGGCGTGCCGGCC 23436 || |||||||| ||||| || |||||||| || | | || || || || || Sbjct 1747 CCAGGTTACTACGAAGGCGAACTCTACAACCTAATTAGACAGGGACGTGGAAGCCCTGCT 1806 Query 23437 GTGCCGCTCATCCTGATCGGCGTCGCGCC 23465 ||||| | || | ||||| ||||||| Sbjct 1807 GTGCCTTTGGTCATTATCGGGATCGCGCC 1835 >seq19899 Length=3433 Score = 246 bits (272), Expect = 1e-60 Identities = 297/404 (74%), Gaps = 0/404 (0%) Strand=Plus/Plus Query 22352 TTCAACCTCGACCCGATCCGGGTTCCGTCGAAATACCCCGGCAAGAAATACTTCAAGGGG 22411 |||||||| || || ||||| |||||||||||||| || ||||||| ||| || Sbjct 1352 TTCAACCTTGATCCTATCCGTCCCCCGTCGAAATACCCTCAGAAAAAATACTACAAAGGC 1411 Query 22412 CCGAAAGCCGGTCAGCTCTCCTGCAATCCGCTGGGGAAAAACCCCGGCGATGTGTGGGTT 22471 || || || || ||||| || | |||||| | || || ||||| ||||||| ||||| Sbjct 1412 CCTAAGGCGGGGCAGCTTTCGGGTAATCCGTTAGGTAAGAACCCAAGCGATGTATGGGTA 1471 Query 22472 TTCCCCAACGTCAAGAACAATCACGTCGAAAAGACCGACCACCCGTGCCAATTCCCGGTG 22531 || |||||||| ||||||||||| |||||||| || ||| ||||||||||| || || Sbjct 1472 TTTCCCAACGTGAAGAACAATCATGTCGAAAAAACAATCCATCCGTGCCAATTTCCTGTC 1531 Query 22532 GAGCTGGTCGAACGGCTCGTGCTGTCGCTGACCAACCCCGGCGACGCGGTGTTCGATCCG 22591 ||||| || || || ||||| ||||| |||| | || || || |||||||| Sbjct 1532 GAGCTTGTGGAGCGTCTCGTTTTGTCGATGACTGATGAGGGGGATCGTGTATTCGATCCT 1591 Query 22592 TATATGGGCGTGGGGTCATCGGTCGTCGCGGCCCTCAAGAACGATCGAGTCGGCTACGGC 22651 ||| | || || || || ||||| || || || |||||||| | ||| | ||||| || Sbjct 1592 TATTTAGGTGTTGGTTCTTCGGTGGTTGCCGCGCTCAAGAATGGTCGTGAGGGCTATGGT 1651 Query 22652 TGCGACGTCGTGAAGGAGTACGTCGAGGCCGCCTGGGAGCGCGTGCACCAGCTTCGAGCC 22711 || || || |||||||||||||| || || ||||||||||| || |||||| | | Sbjct 1652 TGTGATGTGGTGAAGGAGTACGTTGATATTGCGTGGGAGCGCGTTCATCAGCTTAGGTCT 1711 Query 22712 GGCACACTCCAGACGCGCCCAATGCACAAGCCCGTCTATGACCC 22755 || || | || || || || ||| | || ||||| ||||| || Sbjct 1712 GGAACGTTACAAACTCGTCCGATGGATAAACCCGTGTATGATCC 1755 Score = 188 bits (208), Expect = 3e-43 Identities = 255/359 (71%), Gaps = 0/359 (0%) Strand=Plus/Plus Query 22013 TCGATGCAGCTCGTCGTGACGTCGCCGCCCTACAACATCGGCAAGAAGTACGAAAAGCGG 22072 |||||| || | |||| ||||| ||||| ||||| || ||||| || || ||||| Sbjct 949 TCGATGAAGTTAATCGTCACGTCACCGCCTTACAATATAGGCAAATCCTATGAGAAGCGC 1008 Query 22073 TCGCCGCTGGACGCCTACGTGCAGGCNNNNNNNNNNGTCATCTCCGAGTGCGTGCGGCTT 22132 |||||||| || || || || | || || || ||||| || || ||| Sbjct 1009 TCGCCGCTCGATCAGTATGTTCAAGATCAGGCACAGGTGATATCAGAGTGTGTTCGTCTT 1068 Query 22133 CTCAGCCCGCGCGGCTCGCTCTGCTGGCAGGTCGGCAATCACGTGCAGAAGGGCGAGATA 22192 || ||| || || | || |||||||| || |||||||| | |||||||| ||| Sbjct 1069 CTACACCCAAATGGATCCATTTGTTGGCAGGTTGGGAATCACGTCGACAAGGGCGAAATA 1128 Query 22193 TTCCCGCTCGACACCGTGCTCTATCCGGTCTTTCGCGAGCACGGCCTGAAGCTACGGAAT 22252 || || | ||| |||||| |||| | ||| || |||||| ||||||| | ||| Sbjct 1129 TTTCCCTTGGACCTCGTGCTATATCACCTTTTTAAAGACCACGGCTTGAAGCTTAGAAAT 1188 Query 22253 CGCGTGGTGTGGCATTTCGAGCACGGCCTGCATTGCTCCAATCGCCTGTCCGGCCGCTAC 22312 || | || |||||||| || || ||||| |||||||| || || || || || || || Sbjct 1189 CGGATTGTTTGGCATTTTGAACATGGCCTCCATTGCTCAAAGCGGCTTTCTGGTCGTTAT 1248 Query 22313 GAGACGATTTTGTGGTTCACGAAGGGCGACGACTACGTATTCAACCTCGACCCGATCCG 22371 || ||||| |||||||||||||||| ||||||||| |||||||| || || ||||| Sbjct 1249 GAAACGATCATGTGGTTCACGAAGGGTGACGACTACACGTTCAACCTTGATCCTATCCG 1307 Score = 172 bits (190), Expect = 2e-38 Identities = 386/573 (67%), Gaps = 10/573 (2%) Strand=Plus/Plus Query 22859 TGCGCATCGTCGAGCAGTATTCCCATCTCAACGGCCTCGAGTACCTGTTGGTACACAAGC 22918 |||| || || ||||| ||||| ||||| |||||||||||||| || |||| || |||| Sbjct 1782 TGCGAATAGTGGAGCATTATTCACATCTGAACGGCCTCGAGTATCTTATGGTGCATAAGC 1841 Query 22919 CGACGCTCTGGACAGAGATTCAGGACGTAATCACGACGGTTGACGCATCCATTTGCCGGA 22978 | | || ||| || || || || || ||| | | || || ||| | | | | | Sbjct 1842 CAGCTCTGTGGGACGAAATCCAAGAAGTGATCGCAAACGTCGATGCAACGAAATTCAAAA 1901 Query 22979 CAAAACTGTCGAAGGAAAAG-CGATCCGAAGGCGAAATGCTCTACTCGCCCCGTGCGATG 23037 | || | || || ||||| | || | || | |||||||| | || | ||| Sbjct 1902 CCAAGGTTTCCAAAGAAAAAACCATG-GCCGGTAAGATGCTCTATGCTCCTATCGAAATG 1960 Query 23038 AACAAGGCCATTGACCAAGGCTTCGCTCAA---CACGGCTGGGGCGAGCGTCGAATTTCG 23094 |||||||| || || || || |||| | || |||| ||| | ||| || Sbjct 1961 AACAAGGCGATGGATGCAGAGTT---TCAAGCGCGTGGATGGGCAGAGTCTAGAACGTCA 2017 Query 23095 TATTGGGTCACGTCAGACGCGAAATTGATCCGCAAAACGCTTTTCATGAGCCCCGAGCAG 23154 |||||||| || || |||| ||||||||||||| | ||| || | | Sbjct 2018 TATTGGGTGACCAAGGATGCGAGCCTGATCCGCAAAACCATGACGATGGATCCGAAAGAA 2077 Query 23155 CAAAAGGCTGAGATCGAAGGC-GCGGGACAGAAGCCATTTTCGTCCTACAACCAAACCGA 23213 || ||| |||||| | ||||| | | | || || || | |||||| || || Sbjct 2078 CAGAAGCAGGAGATCATTGATAGCGGGCAAACACCTATCTTT-TCATTCAACCAGACGGA 2136 Query 23214 CTTCGTGAAGGAGCGGGTCGCGGTAGAGGTCCAGTTCGGCAAGTACGCGTTCGTGGCCTA 23273 ||||| ||||| || ||||| || ||||| |||||||| || || || || || |||| Sbjct 2137 TTTCGTCAAGGATCGTGTCGCAGTTGAGGTTCAGTTCGGAAAATATGCCTTTGTTGCCTT 2196 Query 23274 TGACCTGTTCGTGAAGCATCTGGCGTTCTACGTCGGCGACGTGATCGACGTCGGCGTGGA 23333 ||| |||| || || ||| |||| |||| || || |||||||| ||| | ||| | || Sbjct 2197 TGATTTGTTTGTAAAACATATGGCTTTCTTTGTTGGTGACGTGATTGACTTGGGCATCGA 2256 Query 23334 AATCCTGCCGATGAAGGAGCTCCAGCAGCAGATGTCGTCGGGCGTTGGCTACTACGAGGG 23393 || ||||| ||||| ||||| ||| | ||||| || ||| || ||||| ||||| Sbjct 2257 GATTCTGCCCATGAAAGAGCTTCAGGCTGAAATGTCATCTGGCCCAGGTTACTATGAGGG 2316 Query 23394 CGAGCTGTACAACCTCATCCGCGAAGGGCGCGG 23426 |||||| |||||| | ||| | | || ||||| Sbjct 2317 CGAGCTCTACAACTTAATCAGGCAGGGACGCGG 2349 >seq46863 Length=1618 Score = 111 bits (122), Expect = 6e-20 Identities = 152/210 (72%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 23233 GCGGTAGAGGTCCAGTTCGGCAAGTACGCGTTCGTGGCCTATGACCTGTTCGTGAAGCAT 23292 || || || ||||| || || || || | || ||||| | |||| | || || || ||| Sbjct 1381 GCAGTCGAAGTCCAATTTGGAAAATATTCTTTTGTGGCATTTGACTTATTTGTTAAACAT 1440 Query 23293 CTGGCGTTCTACGTCGGCGACGTGATCGACGTCGGCGTGGAAATCCTGCCGATGAAGGAG 23352 |||| || | || || |||||||||||| | || | ||||| ||||| ||||| ||| Sbjct 1441 ATGGCTTTTTTTGTTGGAGACGTGATCGACTTGGGTATTGAAATACTGCCTATGAAAGAG 1500 Query 23353 CTCCA-GCAGCAGATGTCGTCGGGCGTTGGCTACTACGAGGGCGAGCTGTACAACCTCAT 23411 || || |||| ||||||| || || || ||||| |||||||| ||||| ||||| || Sbjct 1501 CTTCAGGCAG-AGATGTCATCAGGTCCGGGGTACTATGAGGGCGAACTGTATAACCTTAT 1559 Query 23412 CCGCGAAGGGCGCGGCGTGCCGGCCGTGCC 23441 | | | || || ||| ||||| || || Sbjct 1560 CAGGCAGGGACGTGGCAGCCCGGCGGTACC 1589 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 200413032942024