Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ephydra_20gracilis_20[genbank_20GCA_5F001014675.1_202015-05-28] 61,434 sequences; 410,872,512 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq10562 118 1e-21 >seq10562 Length=15860 Score = 118 bits (130), Expect = 1e-21 Identities = 269/400 (67%), Gaps = 6/400 (2%) Strand=Plus/Plus Query 175746 AACCTGTGCCAATACCTTCGGTGCCGTTCACGAGAACCATTGGAAGCGTTGGCATATAGA 175805 |||||||||||||||| || | ||| ||||| | | ||| || | | || ||||| Sbjct 332 AACCTGTGCCAATACCATCTGCGCCATTCACCAACAGCATGGGTATGATGGGAATATACC 391 Query 175806 AGTCTGGTTCAATCGCACGCCCATCATCGTCCAAATAGTTGAGCACGGGGTCATCCCTCG 175865 | ||||||||| | || |||||| | ||| | | || || ||||| | Sbjct 392 AACATGGTTCAATTTTTTGGCCGTCATCGACTTCGTAGGTCAACAGTGGATCATCAGAAG 451 Query 175866 GATCAAAGATTTTACGAGCATCCTTGGTGAGTT--TTGTGAAGATGTACCTCGTTTGAGA 175923 ||| |||||| || | || |||||| | |||||||||| || | || || Sbjct 452 GATGAAAGATCAACCGTG--TCAGTGGTGACATAATTGTGAAGATATAACGCGCGCTAG- 508 Query 175924 CGC-ATCTTTGCCACCCATGAGACGCGTCCCAAATTGACCACATGGCTCAAGGAGATTGA 175982 ||| ||| || ||||| | ||| || ||||| ||||| | || ||||| | ||| | Sbjct 509 CGCAATCCTTTCCACCGGCTAAACGTGTACCAAACTGACCGCGCGGTTCAAGCAAATTTA 568 Query 175983 TATTGTTTGAGCCCATATAGTCATTCGCCAACTTGACAATCGTATCCGCGAGGGAGACTT 176042 |||| || ||||| | ||||| | |||||| |||||||| || | || || | || Sbjct 569 TATTATTGGAGCCAACATAGTTTTGCGCCAAATTGACAATAGTCGACTGCAGCGACATTT 628 Query 176043 CACCGTGATGGTAGGCCGACTTGTCCGCCACATACGCCGCCAACTGCGCCACCTTCATCT 176102 |||| ||||| ||||| ||| | ||||| || | | | | ||| ||||| || | || Sbjct 629 CACCATGATGATAGGCGGACATTTCCGCAACCGAACCGGAGAGCTGTGCCACTTTAACCT 688 Query 176103 CATCCTTGAGGTTCTTGTGGAAGCACGCATACATGACCTT 176142 || ||| ||| | |||||||| | |||| ||||| Sbjct 689 CACGTTTGTCGTTACGCTTGAAGCACGTAAACATTACCTT 728 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613036072483440