Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ephydra_20gracilis_20[genbank_20GCA_5F001014675.1_202015-05-28] 61,434 sequences; 410,872,512 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq4449 125 8e-24 seq56942 116 4e-21 >seq4449 Length=67262 Score = 125 bits (138), Expect = 8e-24 Identities = 167/232 (72%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 46366 GCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGA 46425 ||| || | || ||||||||||| |||||| ||| || ||||||||||||||||| || Sbjct 64508 GCCACCACGTAGACGCAACACCAAATGCAAAGTAGATTCTTTTTGGATATTGTAGTCAGA 64449 Query 46426 TAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGG 46485 || ||||| | || || ||||| ||||| || |||||||| ||||| || || | || Sbjct 64448 GAGGGTGCGGCCATCTTCCAGCTGTTTGCCAGCAAATATCAAACGCTGTTGATCTGGAGG 64389 Query 46486 CACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCAC 46545 | | ||| |||||| ||||| |||| | | | || || | || || Sbjct 64388 AATTCCCTCTTTGTCCTGAATCTTGGCTTTGACATTTTCGATAGTATCAGAGGGCTCAAC 64329 Query 46546 ATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCATTTTG 46597 || | ||||||||||||||||| || || ||||| ||||| ||||| ||| Sbjct 64328 CTCAAGAGTGATGGTTTTGCCCGTTAGGGTCTTAACGAAGATCTGCATGTTG 64277 >seq56942 Length=2534 Score = 116 bits (128), Expect = 4e-21 Identities = 144/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462 |||||||| || ||||||||||| | ||||| | || |||||||| ||||| ||||| Sbjct 244 TCCTTTTGTATGTTGTAGTCGGACAATGTGCGTCCATCTTCGAGCTGTTTGCCAGCGAAG 185 Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTC 46522 |||| || ||||| || | ||| | | ||| || || || ||| |||| || Sbjct 184 ATCAGACGTTGCTGATCTGGCGGTATACCCTCTTTATCTTGAATTTTCGCTTTGACATTC 125 Query 46523 GCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACA 46582 | | |||||| | ||| || |||| ||| || || || || ||||||||||| ||| Sbjct 124 TCAATCGTGTCCGATGGTTCAACTTCCAGCGTAATCGTCTTACCAGTCAGCGTTTTCACA 65 Query 46583 AAGATTTGCATTTTGCA 46599 |||||||||||||| || Sbjct 64 AAGATTTGCATTTTTCA 48 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 564804339301680