Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ephydra_20gracilis_20[genbank_20GCA_5F001014675.1_202015-05-28] 61,434 sequences; 410,872,512 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq4167 183 1e-40 seq22686 165 3e-35 seq40 140 1e-27 seq56942 132 2e-25 seq10474 131 7e-25 seq10185 125 3e-23 seq4449 109 2e-18 seq4760 102 3e-16 seq41424 98.7 4e-15 seq37138 93.3 2e-13 >seq4167 Length=34597 Score = 183 bits (202), Expect = 1e-40 Identities = 460/695 (66%), Gaps = 7/695 (1%) Strand=Plus/Minus Query 450914 GCAATTGGAATTGATCTTGGAACCACCTTTTCATGTGTAGGTGTTTACCAAAATGGAAAT 450973 ||| |||| |||||| | ||||| |||| || || || ||||||| |||| | || || Sbjct 5896 GCAGTTGGTATTGATTTGGGAACAACCTACTCGTGCGTGGGTGTTTTCCAACACGGCAAA 5837 Query 450974 GTAGAAATTATAGCAAATGACCAAGGATCACGAACTACTCCTTCATGGGTAAGTTTTACG 451033 || |||||||| || || || || || || || || || || | ||| || || Sbjct 5836 GTTGAAATTATTGCCAACGATCAGGGTAATCGTACAACACCATCGTATGTAGCCTTCACT 5777 Query 451034 GATTCAGAAAGACTTTTAGGGCAAGCTGCTAAA--TCAATGGTAAATTCAAATGCCAAAA 451091 || | || | | | || | ||||| ||| |||| ||| | ||| | | | Sbjct 5776 GAGACTGAGCGTTTGATTGGTGATGCTGCCAAAAATCAA--GTAGCTATGAATCCAACCA 5719 Query 451092 ACACAGTATATGATGCTAAACGTTTAATTGGCCGTATGTATGATGATGATACTGTACAAA 451151 |||| | | ||||| || ||||| |||||||||| | || ||| ||||||| Sbjct 5718 ACACTATTTTCGATGCCAAGCGTTTGATTGGCCGTAAATTCGAGGATAGCGCTGTACAGG 5659 Query 451152 AAGAGAAAAAATTCTTTTCTTATGATGTAGTAAATCAAAAAGGAAAGCCCTATATTCAAG 451211 || | || | | | ||| ||||| | | || || || | ||||||| Sbjct 5658 CCGATATGAAGCATTGGCCATTTGAAGTAGTTAGCGTTGATGGCAAACCAAAAATTCAAG 5599 Query 451212 TAAATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAAATTTCATCTATGGTTCTTA 451271 | || || | ||| | || || || ||||| ||||| ||||| |||||| | Sbjct 5598 TTTTCTACAAGGATGAGAAGAAGACATTCTTCCCTGAGGAAATCTCATCAATGGTTTTGT 5539 Query 451272 CTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCAGTAATTA 451331 | || ||||| ||||| || || ||| | || | || | |||| || || | Sbjct 5538 CAAAGATGAAGGAAACTGCTGAGGCTTATTTGGGCAAAACTGTCTCAAATGCTGTCATCA 5479 Query 451332 CTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACATATTG 451391 | ||||| || || ||||||||| |||| || ||||| || |||||||| || ||||| Sbjct 5478 CAGTTCCAGCCTACTTCAATGATTCACAGCGTCAAGCTACCAAAGATGCCGGCGCTATTG 5419 Query 451392 CTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATATGGAC 451451 |||| || ||||| | || || || || |||||||| || ||||| | || ||||| | Sbjct 5418 CTGGCTTGAATGTGTTGCGTATCATCAACGAACCTACTGCTGCTGCCATCGCCTATGG-C 5360 Query 451452 TAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTATTTGATTTTGGTGGAGGAA 451511 | ||| || ||||| | | || ||| | | | |||||||| || || || | Sbjct 5359 TTGGATAA--AAAAGCCTCTGGCGAGCGTAATGTGCTGATTTTTGATTTGGGCGGCGGCA 5302 Query 451512 CTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTTGAAGTAAAGGCAACCAATG 451571 || |||| || | ||||||||||| ||||| | || || || ||| | || || Sbjct 5301 CTTTTGATGTCTCCATTCTTTCAATTGATGATGGCATCTTCGAGGTCAAGTCCACAGCTG 5242 Query 451572 GTGATACTCATCTAGGAGGTGAAGATATTGATAAT 451606 |||| |||||| |||| || |||||| |||||||| Sbjct 5241 GTGACACTCATTTAGGTGGCGAAGATTTTGATAAT 5207 >seq22686 Length=27107 Score = 165 bits (182), Expect = 3e-35 Identities = 142/176 (81%), Gaps = 0/176 (0%) Strand=Plus/Minus Query 451274 AAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCAGTAATTACT 451333 ||||||||||| ||||| ||| ||| | || ||| || | |||| ||| | ||| Sbjct 5176 AAAATGAAAGAGACAGCTGAATCGTATTTGAATTGTCCTGTGAAGAATGCGGTAGTAACT 5117 Query 451334 GTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACATATTGCT 451393 || || || |||||||||||| ||||| ||||||| || |||||||| || || |||||| Sbjct 5116 GTACCAGCGTATTTCAATGATTCACAAAGGCAAGCCACAAAAGATGCTGGCCAAATTGCT 5057 Query 451394 GGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATATGG 451449 ||||||||||| || ||| ||||||||||||| || |||||||||||||| ||||| Sbjct 5056 GGTTTAAATGTCCTACGAGTTATTAATGAACCAACGGCAGCTGCTCTAGCTTATGG 5001 >seq40 Length=31105 Score = 140 bits (154), Expect = 1e-27 Identities = 209/294 (71%), Gaps = 12/294 (4%) Strand=Plus/Plus Query 451319 GATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGAT 451378 || || || ||||| || |||||||||||||| || |||| ||||| || ||||||||| Sbjct 785 GACGCTGTCATTACGGTACCCGCTTATTTCAACGACTCACAGCGGCAGGCGACTAAAGAT 844 Query 451379 GCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCT 451438 || || ||||||||| |||||||| | || || ||||| || || || || ||||| Sbjct 845 GCTGGCTCTATTGCTGGCTTAAATGTGTTGCGCATAATTAACGAGCCCACCGCGGCTGCC 904 Query 451439 CTAGCATATGGACTAGG---AAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTATTT 451495 |||| ||||| || || |||||| ||| | || || ||| |||| | || Sbjct 905 TTAGCGTATGG-CTTGGATAAAAATCTGAAG-----GGTGAGAAGAATGTTTTGATCTTC 958 Query 451496 GATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTGAAGATGG---GGTATTT 451552 ||| | ||||| || ||| ||| || |||| ||||||| || || | |||| Sbjct 959 GATCTGGGTGGTGGCACTTTCGATGTCTCGATACTCACAATTGACGAGGGTTCGCTATTC 1018 Query 451553 GAAGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGATATTGATAAT 451606 ||||| ||| | ||| ||| ||||| ||| | || ||||| ||| | || ||| Sbjct 1019 GAAGTCAAGTCCACCGCTGGCGATACGCATTTGGGCGGTGAGGATTTCGACAAT 1072 >seq56942 Length=2534 Score = 132 bits (146), Expect = 2e-25 Identities = 157/213 (74%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108 |||| | || || || ||||| ||||||||||| || ||||| || || |||||| |||| Sbjct 53 AATGCAAATCTTTGTGAAAACGCTGACTGGTAAGACGATTACGCTGGAAGTTGAACCATC 112 Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168 || | ||||| | | ||| |||||||||||||| || || || || || ||||| Sbjct 113 GGACACGATTGAGAATGTCAAAGCGAAAATTCAAGATAAAGAGGGTATACCGCCAGATCA 172 Query 391169 ACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAA 391228 |||||| | || ||| | || ||||| || ||||||||| | || ||| | || || || Sbjct 173 GCAACGTCTGATCTTCGCTGGCAAACAGCTCGAAGATGGACGCACATTGTCCGACTACAA 232 Query 391229 TATTGATAAGGATGCAACACTTCACTTAGTATT 391261 || | ||||| | || |||||||| || || Sbjct 233 CATACAAAAGGAATCGACGCTTCACTTGGTTTT 265 >seq10474 Length=16671 Score = 131 bits (144), Expect = 7e-25 Identities = 246/359 (69%), Gaps = 6/359 (2%) Strand=Plus/Plus Query 451238 TTTGCTCCTGAAGAAATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAA 451297 ||||| || |||||||| || |||||||| | || ||||| || || || || Sbjct 9493 TTTGCGCCCGAAGAAATCTCCGCTATGGTTTTGGGCAAGATGAAGGAGACCGCTGAGGCT 9552 Query 451298 TATATTGGTTCTCCAGTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCA 451357 ||| | ||| || || | || || |||| || || || || || ||||||||| Sbjct 9553 TATTTGGGTAAGAAGGTGACACACGCTGTCGTTACGGTGCCAGCCTACTTTAATGATGCA 9612 Query 451358 CAACGGCAAGCAACTAAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATT 451417 ||||| ||||| || |||||||| || |||||||| || |||||| | || ||||| Sbjct 9613 CAACGTCAAGCCACCAAAGATGCTGGCGTCATTGCTGGATTGAATGTTATGCGCATTATC 9672 Query 451418 AATGAACCTACAGCAGCTGCTCTAGCATATGGACTAGGAAAATCAAAAGAAACAGAAGaa 451477 ||||| || || || || ||| | || ||||| | ||| || || || || ||| Sbjct 9673 AATGAGCCCACCGCTGCCGCTATTGCCTATGG-TTTGGATAA--GAAGGA---AGGCGAA 9726 Query 451478 aaaaaTATTTTAGTATTTGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATT 451537 || ||| | || || || ||||| || || || || ||| || | | | ||| Sbjct 9727 AAGAATGTGTTGGTCTTCGATTTGGGCGGCGGCACCTTCGATGTCTCCCTGTTGACCATT 9786 Query 451538 GAAGATGGGGTATTTGAAGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGA 451596 || |||| || ||||||||| || ||||| |||||||| ||| |||| || || || Sbjct 9787 GACAATGGTGTGTTTGAAGTAGTTGCTACCAACGGTGATACACATTTAGGTGGCGAGGA 9845 >seq10185 Length=35228 Score = 125 bits (138), Expect = 3e-23 Identities = 150/204 (74%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108 |||| | || || || ||||| || || || ||||||||||| | || || ||| | || Sbjct 2766 AATGCAAATCTTTGTAAAAACTCTTACCGGGAAAACTATTACCTTGGAGGTAGAACCTTC 2707 Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168 |||| || || | | ||| |||||||||||||| ||||| ||||| || ||||| Sbjct 2706 GGATACTATCGAGAATGTAAAAGCTAAAATTCAAGATAAAGAAGGTATTCCACCAGATCA 2647 Query 391169 ACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAA 391228 |||||||| ||||| | || || ||| | ||||||||| | || || | || ||||| Sbjct 2646 GCAACGTTTGATTTTTGCTGGTAAGCAATTGGAAGATGGACGCACATTATCTGACTATAA 2587 Query 391229 TATTGATAAGGATGCAACACTTCA 391252 ||| | || || |||||||||| Sbjct 2586 TATCCAGAAAGAGTCAACACTTCA 2563 >seq4449 Length=67262 Score = 109 bits (120), Expect = 2e-18 Identities = 119/158 (75%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || |||||||| || || || || ||||| || |||||||| ||||| | ||| Sbjct 64281 ATGCAGATCTTCGTTAAGACCCTAACGGGCAAAACCATCACTCTTGAGGTTGAGCCCTCT 64340 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 |||| || ||| | | ||| || ||||| || || || ||||||||||| |||||| Sbjct 64341 GATACTATCGAAAATGTCAAAGCCAAGATTCAGGACAAAGAGGGAATTCCTCCAGATCAA 64400 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGG 391207 || ||||| || || | || ||||| || |||||||| Sbjct 64401 CAGCGTTTGATATTTGCTGGCAAACAGCTGGAAGATGG 64438 >seq4760 Length=7449 Score = 102 bits (112), Expect = 3e-16 Identities = 145/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108 |||| | || || || ||||| || | | ||||| |||| | || | ||| | || Sbjct 1854 AATGCAAATCTTTGTAAAAACTCTTAACGAGAAAACCATTAACTTGGAGCTAGAACCTTC 1913 Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168 |||| | ||| ||| ||| |||||| ||||||| ||||| ||||| || || || Sbjct 1914 AGATACTACCGAAAATATAAAAGCTAAAATTTAAGATAAAGAAGGTATTCCACCAGAGCA 1973 Query 391169 ACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAA 391228 ||||||||| ||||| | || || ||| | ||| ||||| | | || ||||| || || Sbjct 1974 ACAACGTTTGATTTTTGCTGGTAAGCAATTGGAAAATGGACGCATATTAGCGGACTACAA 2033 Query 391229 TATTGATAAGGATGCAACACTTCA 391252 ||| | || ||| |||||||||| Sbjct 2034 TATCTAGAAAGATTCAACACTTCA 2057 >seq41424 Length=9748 Score = 98.7 bits (108), Expect = 4e-15 Identities = 241/363 (66%), Gaps = 3/363 (1%) Strand=Plus/Plus Query 451244 CCTGAAGAAATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAATATATT 451303 || ||||| || || || ||||| || || || ||| ||||| || ||| ||| | Sbjct 1671 CCCGAAGAGATCTCGTCGATGGTGCTGACGAAGATGCGCGAAACTGCCGAATCGTATTTG 1730 Query 451304 GGTTCTCCAGTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGG 451363 || | ||| || ||||| || | || || || || ||||||||||| | || || Sbjct 1731 GGGCGACAAGTGACCGATGCTGTCGTCACCGTGCCGGCGTATTTCAATGACTCGCAGCGT 1790 Query 451364 CAAGCAACTAAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAA 451423 || || || || ||||| || ||| || ||||| ||||| | || || || || || Sbjct 1791 CAGGCGACAAAGGATGCGGGCGCTATAGCGGGTTTGAATGTGTTACGTATCATCAACGAG 1850 Query 451424 CCTACAGCAGCTGCTCTAGCATATGGACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaT 451483 ||||| || || || | || ||||| | ||| || ||||| || || ||| Sbjct 1851 CCTACGGCGGCAGCAATTGCCTATGG-TTTGGACAA--AAAAGGCACCAGCGAGCGCAAT 1907 Query 451484 ATTTTAGTATTTGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTGAAGAT 451543 | || |||| ||| | || || || || ||| || ||||| | ||||| ||| Sbjct 1908 GTGTTGATATTCGATCTCGGCGGCGGCACATTCGATGTCTCCGTACTCACGATTGAGGAT 1967 Query 451544 GGGGTATTTGAAGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGATATTGAT 451603 || ||||||| || ||||| ||| || || || || | || || |||||| | || Sbjct 1968 GGCATATTTGAGGTGAAGGCCACCGCCGGCGACACACACTTGGGCGGCGAAGATTTCGAC 2027 Query 451604 AAT 451606 ||| Sbjct 2028 AAT 2030 >seq37138 Length=11844 Score = 93.3 bits (102), Expect = 2e-13 Identities = 110/149 (74%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 502357 AAAAATATGGAACTAGAAACAGTTTGCTTACAGCACTAATGCCAACAGCATCTACATCTC 502416 |||| ||||| | |||| ||| ||| || | ||||| |||||||| ||| ||| Sbjct 4058 AAAAGTATGGCATACGAAATTCTTTACTTGTTGCTCCCATGCCTACAGCATCAACAGCTC 3999 Query 502417 AACTATTAGGCAATTATGAATCATTTGAACCATTTACTTCTAATATATATACTAGAAGAA 502476 || | | || ||| ||||||| |||||||| | ||||||||||||||| || || | Sbjct 3998 AAATTCTTGGGAATAATGAATCCTTTGAACCTTATACTTCTAATATATACACCAGGCGTG 3939 Query 502477 CTTTAGCAGGTGAATTTATAGTTGTTAAT 502505 |||| | |||||||| |||||||||| Sbjct 3938 TTTTATCTGGTGAATTCCAAGTTGTTAAT 3910 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1974163266358872