Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ephydra_20gracilis_20[genbank_20GCA_5F001014675.1_202015-05-28] 61,434 sequences; 410,872,512 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq37138 118 1e-21 seq28107 89.7 6e-13 seq10562 84.2 3e-11 >seq37138 Length=11844 Score = 118 bits (130), Expect = 1e-21 Identities = 436/676 (64%), Gaps = 13/676 (2%) Strand=Plus/Minus Query 112305 GAGACTGGTACACCATATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAG 112364 || || || ||||| |||||| | || || || | |||||| ||| ||||||||||| Sbjct 4629 GAAACAGGAACACCGTATATGTTGTATAAGGATTCTTGTAACAGAAAAAGTAATCAAAAA 4570 Query 112365 AATTTGGGTGTGATCAAGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAA 112424 ||| | ||| ||||| | ||| | ||||| ||||| | |||| | ||| | Sbjct 4569 AATATTGGTACCATCAAATGCAGCAATTTGTGTACTGAAATTGTCGAATATTCAGCGCCA 4510 Query 112425 GATGAGACGGCTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAG 112484 ||||||| || || || || || ||||| || ||||| || || | | | | Sbjct 4509 GATGAGATAGCCGTTTGCAATCTAGCATCTATTGCTCTTAACATGT---TCATTTCTGCT 4453 Query 112485 ACAAAGACATTTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTA 112544 | ||| | | ||||| | |||| || | ||||| || |||||||| |||||||| | Sbjct 4452 AATAAGTCTTATGATTTTCAAAAGCTTAAAGAAGTAACTAAAACTGTTACAAAAAATTTG 4393 Query 112545 AACAGAGTTATTGATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGA 112604 || | | | || |||| ||||| ||| || || || |||||||||||||| Sbjct 4392 AATAAAATCATAGATATAAATTATTATCCTCTTCCTGAAGCCAAGAAATCTAATATGAGG 4333 Query 112605 CACCGTCCAATTGGTCTCGGTGTCCAAGGTCTCGCGGATGTATTCATTCTTTGTCGCCAC 112664 || || || || || | || || || ||| | || |||| | | || || || | Sbjct 4332 CATCGACCCATAGGAATTGGAGTTCAGGGTTTTGCAGATGCACTTATACTGATGCGTTAT 4273 Query 112665 GCATTTGATTCCGACGAAGCGAAGGAAATCAATGCGCGTATATTTGAGACAATGTATCAC 112724 ||| ||| ||| |||| | | ||| | |||||||| ||||| || | Sbjct 4272 CCATATGAAAGCGAGCAAGCATATTTGCTAAATATACAAATATTTGAAACAATCTACTAT 4213 Query 112725 GCCGCTCTTGAGGCGAGTTCGGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAG 112784 | || | ||||| || | || || || || || ||||| |||||| | | ||| Sbjct 4212 GGAGCATTAGAGGCAAGCTGTGAATTAGCGGAAGTGTTCGGTCCTTATGAATCATATGAA 4153 Query 112785 GGTTCTCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGT--GAGACCAAGC 112842 || ||| | |||| | | |||| || |||||| | | | | | ||| | Sbjct 4152 GGGAGTCCTGTAAGCAAAGGCATATTACAATACGACATGTGGAATGTTACGCCAACAAAC 4093 Query 112843 TTCACTACGACTGGGACGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTC 112902 || | || ||| | ||| | ||||| | || | || | || | || | | || Sbjct 4092 TT--GTGGGATTGGAATGCTTTAAAGGAGAGAATTCAAAAGTATGGCATACG--AAATTC 4037 Query 112903 TTT--TGATGGCACCAATGCCAACAGCCTCCACCGCACAAA-TCTTGGGTAATAATGAAT 112959 ||| | | || || ||||| ||||| || || || |||| ||||||| |||||||||| Sbjct 4036 TTTACTTGTTGCTCCCATGCCTACAGCATCAACAGCTCAAATTCTTGGG-AATAATGAAT 3978 Query 112960 GCTTTGAACCCTACAC 112975 ||||||||| || || Sbjct 3977 CCTTTGAACCTTATAC 3962 >seq28107 Length=66327 Score = 89.7 bits (98), Expect = 6e-13 Identities = 139/194 (72%), Gaps = 6/194 (3%) Strand=Plus/Minus Query 16059 CCCACGGCATCAATCTCATCAATGAAGACGATGCATGGTTGATTTTCGCGAGCGACTTCA 16118 ||||| |||||||||||||||||||| | |||||||| || || ||| || | | || Sbjct 22697 CCCACCGCATCAATCTCATCAATGAAAAGAATGCATGGCGCATGTTTGCGTGCCATTGCA 22638 Query 16119 AAGAGATCCCGTACACGCTTGGCG--CCCACACCAACAAACATCTCCACAAAGTTTGCGG 16176 || | ||| || ||||| || || || || || |||||||| |||| ||| | || | Sbjct 22637 AACATATCACGGACACG--TGACGGTCCAACGCCCACAAACATTTCCAAAAACTCTGAGC 22580 Query 16177 CGGA-ACATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTC 16235 | || || | ||||| || ||||| | ||| ||||| | ||| ||||| | || Sbjct 22579 CAGACACGGT-AATGAACGGTACATTTGCTTCTCCCGCTGTCGCTTTAGCGAGTAACGTT 22521 Query 16236 TTACCCGTACCTGG 16249 || || || ||||| Sbjct 22520 TTGCCAGTGCCTGG 22507 >seq10562 Length=15860 Score = 84.2 bits (92), Expect = 3e-11 Identities = 215/320 (67%), Gaps = 8/320 (3%) Strand=Plus/Plus Query 175945 TGGATCATCTCTCGGATCAAAGATCTTTCGGGCATCTTTTGTGAGCT--TTGTAAAGATA 176002 ||||||||| |||| ||||||| || | || | |||| | |||| |||||| Sbjct 438 TGGATCATCAGAAGGATGAAAGATCAACCGTG--TCAGTGGTGACATAATTGTGAAGATA 495 Query 176003 TACCTCGTTTGAGACGCA-TCCTTACCACCCATGAGACGCGTACCAAACTGACCACACGG 176061 || | || || |||| ||||| ||||| | ||| |||||||||||||| | ||| Sbjct 496 TAACGCGCGCTAG-CGCAATCCTTTCCACCGGCTAAACGTGTACCAAACTGACCGCGCGG 554 Query 176062 CTCAAGAAGATTGATATTGTTTGAACCCATGTAGTCATTCGCCAACTTGACAATCGT-GT 176120 ||||| | ||| ||||| || || || | |||| | |||||| |||||||| || | Sbjct 555 TTCAAGCAAATTTATATTATTGGAGCCAACATAGTTTTGCGCCAAATTGACAATAGTCGA 614 Query 176121 CCGCGAGAGAGACTTCACCGTGGTGGTACGCACTCTTCTCTGCGACAAATGCCGCCAACT 176180 | || || || | |||||| || || || || | | || || || | | | | || Sbjct 615 CTGC-AGCGACATTTCACCATGATGATAGGCGGACATTTCCGCAACCGAACCGGAGAGCT 673 Query 176181 GCGCCACTTTCATCTCATCCTTGAGATTCTTGTGGAAACATGCGTACATAACCTTGCGTT 176240 | |||||||| | |||| ||| || | ||| || | |||| ||||| |||| Sbjct 674 GTGCCACTTTAACCTCACGTTTGTCGTTACGCTTGAAGCACGTAAACATTACCTTACGTT 733 Query 176241 GCGAAGGCTTGAGACCATCC 176260 | ||| || | ||| ||| Sbjct 734 GGCCAGGTTTAAAACCGTCC 753 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620265716392480