Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ephydra_20gracilis_20[genbank_20GCA_5F001014675.1_202015-05-28] 61,434 sequences; 410,872,512 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq28107 87.8 2e-12 >seq28107 Length=66327 Score = 87.8 bits (96), Expect = 2e-12 Identities = 136/192 (71%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 9366 CCCACGGCATCAATCTCATCAATGAAGACAATACATGGTTGATTTTCGCGGGCGATTTCA 9425 ||||| |||||||||||||||||||| | ||| ||||| || || ||| || ||| || Sbjct 22697 CCCACCGCATCAATCTCATCAATGAAAAGAATGCATGGCGCATGTTTGCGTGCCATTGCA 22638 Query 9426 AAGAGATCGCGAACCCTTTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGCGGCG 9485 || | ||| || || | | | || || || |||||||| |||| ||| | || | | Sbjct 22637 AACATATCACGGACACGTGACGGTCCAACGCCCACAAACATTTCCAAAAACTCTGAGCCA 22578 Query 9486 GA-ACATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTT 9544 || || | ||||| || ||||| | ||| ||||| | ||| ||||| | || || Sbjct 22577 GACACGGT-AATGAACGGTACATTTGCTTCTCCCGCTGTCGCTTTAGCGAGTAACGTTTT 22519 Query 9545 ACCCGTACCTGG 9556 || || ||||| Sbjct 22518 GCCAGTGCCTGG 22507 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589527738994160