Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ephydra_20gracilis_20[genbank_20GCA_5F001014675.1_202015-05-28] 61,434 sequences; 410,872,512 total letters Query= NC_015266.1 Length=40555 Score E Sequences producing significant alignments: (Bits) Value seq52154 93.3 1e-14 >seq52154 Length=6058 Score = 93.3 bits (102), Expect = 1e-14 Identities = 132/184 (72%), Gaps = 4/184 (2%) Strand=Plus/Minus Query 35836 TTCTTCACGTTTTCCAACACGAAGGCCGCAGGTCGCTTCGCTG--CGATGATCCGGGCTA 35893 ||||||||||| |||| || |||||| | || || | | || |||||||| ||| | Sbjct 2893 TTCTTCACGTTCTCCAGCAGGAAGGCAGGGGGGCGGT--GATGGTCGATGATCTTGGCCA 2836 Query 35894 CGTCGAAAAATAGAGTGCCCTGAGTAGTGCACTCGAAGCCGTGCGGGCGGCCCAGTGAGT 35953 ||| | || || || ||||| || |||| ||| ||||| || || |||| | | Sbjct 2835 GATCGTAGAACAGCGTTCCCTGCGTGTCGCACAGGAAACCGTGGGGACGACCCAAGGCAT 2776 Query 35954 TCTTTTTGCTTACTCCCGCGATACTAAACGGCTGGCAAGGGAAGCCGGCAAGCAAGACGT 36013 |||| ||||| || ||||| || |||||||| || ||||| ||||| || | |||| Sbjct 2775 TCTTCTTGCTAACGCCCGCAATCGAGAACGGCTGACAGGGGAACCCGGCCAGAAGCACGT 2716 Query 36014 CATG 36017 |||| Sbjct 2715 CATG 2712 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 129559813387636