Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ephydra_20gracilis_20[genbank_20GCA_5F001014675.1_202015-05-28] 61,434 sequences; 410,872,512 total letters Query= NC_015280.1 Length=181044 Score E Sequences producing significant alignments: (Bits) Value seq15355 118 1e-21 >seq15355 Length=37128 Score = 118 bits (130), Expect = 1e-21 Identities = 343/520 (66%), Gaps = 16/520 (3%) Strand=Plus/Plus Query 154593 TTATGTGATATCACAGGGTTTGATTCTATATCATTACAACCTAACGCAGGATCACAGGGT 154652 || || || || || || | |||| |||||||| || || ||| | || |||| ||| Sbjct 26963 TTGTGCGAGATAACCGGCTATGATAAAATATCATTCCAGCCGAACTCTGGCGCACAAGGT 27022 Query 154653 GAGTATGCAGGACTGTTAGCAATCCAAGCA--TACCATCAAGGATC-AGGAGATGATAAA 154709 |||||||| || || || || | ||| || || | || || ||| || | | | Sbjct 27023 GAGTATGCTGGTTTGCGCGCTATAC--GCAGTTATCA-CGAGCATAGAGGCGAAGGTCAT 27079 Query 154710 AGAAATGTATGTTTGATACCAGAGTCAGCACATGGAACTAATCCTGCTAGTGCTGTCATG 154769 | || ||||||||||||| || |||||||| || || || || ||| ||| Sbjct 27080 CGCAACATATGTTTGATACCTATTTCTGCACATGGCACAAACCCAGCCTCTGCGCAGATG 27139 Query 154770 GCAGGGATGAAAGTTGTAGGTGT-CAAGTGTGATGATGATGGTAACATAGACATCAAAGA 154828 || || |||||||| | | | | | | | | | ||||||| | ||| || || | | Sbjct 27140 GCTGGCATGAAAGTGGAACCTATACGAATATTAA-ATGATGGCAGCATCGATATGGCACA 27198 Query 154829 TCTAGAGAAGAAAGCA----ATCATGAATACATTTGAACTGTCATGTATTATGATTACAT 154884 | | | |||||| | |||| || |||||||| ||| | |||||||| | Sbjct 27199 TTTGCGCGACAAAGCAGCTGAACATGCGAAC----GAACTGTCCTGTCTAATGATTACTT 27254 Query 154885 ACCCATCTACACATGGTGTATTTGAAACTAACATTAGACAGATATGTAAGATCGTTCATG 154944 | ||||| ||| ||||| || || | || | | ||||| | | | || Sbjct 27255 ATCCATCGACAATGGGTGTTTTCGAGGAGACGGTTGCAGAAATATGCGATTTGATACACC 27314 Query 154945 ACAATGGTGGTCAGGTATATCTTGATGGAGCAAATCTAAATGCACAGGTAGGACTAGCAA 155004 | |||| || || || ||||| || || |||||| | ||||||||||||||||| Sbjct 27315 AGCATGGCGGGCAAGTGTATCTGGACGGCGCAAATATGAATGCACAGGTAGGACTCTGTC 27374 Query 155005 AACCATGTGAGTATGGTGCAGATGTATGTCATCTAAACTTACATAAAACATTCTGTATTC 155064 || |||| ||||| ||||||| ||| | || | || ||||||||||| || | Sbjct 27375 GCCCCGGTGATTATGGCAGTGATGTATCCCATTTGAATCTGCACAAAACATTCTGCATAC 27434 Query 155065 CACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATAGGTGT 155104 ||||||| || || ||||||||| | || || || || || Sbjct 27435 CACATGGCGGCGGCGGTCCTGGCATGGGACCAATTGGCGT 27474 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578768008010560