Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ephydra_20gracilis_20[genbank_20GCA_5F001014675.1_202015-05-28] 61,434 sequences; 410,872,512 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq15355 134 2e-26 >seq15355 Length=37128 Score = 134 bits (148), Expect = 2e-26 Identities = 350/522 (67%), Gaps = 20/522 (4%) Strand=Plus/Plus Query 159268 TTATGTGATATCACAGGGTTTGATTCTATATCATTACAACCTAACGCAGGATCACAGGGT 159327 || || || || || || | |||| |||||||| || || ||| | || |||| ||| Sbjct 26963 TTGTGCGAGATAACCGGCTATGATAAAATATCATTCCAGCCGAACTCTGGCGCACAAGGT 27022 Query 159328 GAGTATGCAGGACTGTTAGCAATCCAAGCA--TACCATCAAGGATC-AGGAGATGATAAA 159384 |||||||| || || || || | ||| || || | || || ||| || | | | Sbjct 27023 GAGTATGCTGGTTTGCGCGCTATAC--GCAGTTATCA-CGAGCATAGAGGCGAAGGTCAT 27079 Query 159385 AGAAATGTATGTTTGATACCAGAGTCAGCACATGGAACTAATCCTGCATCAGCAGTGATG 159444 | || ||||||||||||| || |||||||| || || || || || || |||| Sbjct 27080 CGCAACATATGTTTGATACCTATTTCTGCACATGGCACAAACCCAGCCTCTGCGCAGATG 27139 Query 159445 GCAGGGATGAAAGTTGTAGGTGT-CAAGTGTGATGATGATGGCAACATAGACATCAAAGA 159503 || || |||||||| | | | | | | | | | ||||||||| ||| || || | | Sbjct 27140 GCTGGCATGAAAGTGGAACCTATACGAATATTAA-ATGATGGCAGCATCGATATGGCACA 27198 Query 159504 TCTAGAGAAGAAAGCA----ATCATGAATACATTTGAACTGTCATGTATTATGATTACAT 159559 | | | |||||| | |||| || |||||||| ||| | |||||||| | Sbjct 27199 TTTGCGCGACAAAGCAGCTGAACATGCGAAC----GAACTGTCCTGTCTAATGATTACTT 27254 Query 159560 ATCCATCTACACATGGTGTATTTGAAACAAACATCAGACAGATATGTAAGATTG--TTCA 159617 ||||||| ||| ||||| || || | || | |||| || | |||| | || Sbjct 27255 ATCCATCGACAATGGGTGTTTTCGAGG-AGACGGTTG-CAGAAATATGCGATTTGATACA 27312 Query 159618 TGAGAATGGTGGTCAGGTATATCTTGATGGTGCAAATCTAAATGCACAGGTAGGTCTAGC 159677 || |||| || || || ||||| || || |||||| | |||||||||||||| || Sbjct 27313 CCAGCATGGCGGGCAAGTGTATCTGGACGGCGCAAATATGAATGCACAGGTAGGACTCTG 27372 Query 159678 AAAACCATGTGACTATGGTGCAGATGTATGTCATCTAAACTTACATAAGACATTCTGTAT 159737 || |||| ||||| ||||||| ||| | || | || || |||||||| || Sbjct 27373 TCGCCCCGGTGATTATGGCAGTGATGTATCCCATTTGAATCTGCACAAAACATTCTGCAT 27432 Query 159738 TCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATTGGTGT 159779 |||||||| || || ||||||||| | || || ||||| || Sbjct 27433 ACCACATGGCGGCGGCGGTCCTGGCATGGGACCAATTGGCGT 27474 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 587599620782240