Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ephydra_20gracilis_20[genbank_20GCA_5F001014675.1_202015-05-28] 61,434 sequences; 410,872,512 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq56942 167 5e-36 seq10185 132 1e-25 seq4449 100 6e-16 >seq56942 Length=2534 Score = 167 bits (184), Expect = 5e-36 Identities = 166/215 (77%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 194928 CAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATC 194987 |||||| | |||||| || || || ||||| || ||||| |||| | || | ||||| Sbjct 266 CAAAACCAAGTGAAGCGTCGATTCCTTTTGTATGTTGTAGTCGGACAATGTGCGTCCATC 207 Query 194988 TTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTC 195047 ||||||||| || || |||||||| || ||||| || ||||| || || || ||||| || Sbjct 206 TTCGAGCTGTTTGCCAGCGAAGATCAGACGTTGCTGATCTGGCGGTATACCCTCTTTATC 147 Query 195048 TTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGT 195107 ||||||||| ||||| |||||||| |||||||| ||| ||||| || |||| ||| Sbjct 146 TTGAATTTTCGCTTTGACATTCTCAATCGTGTCCGATGGTTCAACTTCCAGCGTAATCGT 87 Query 195108 CTTTCCTGTCAAAGTTTTTACGAACACTTGCATTT 195142 ||| || |||| ||||| || || | |||||||| Sbjct 86 CTTACCAGTCAGCGTTTTCACAAAGATTTGCATTT 52 >seq10185 Length=35228 Score = 132 bits (146), Expect = 1e-25 Identities = 156/211 (74%), Gaps = 0/211 (0%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || || ||||| || |||||||| || ||||| || || | | || | |||||||| Sbjct 2557 ACCAGATGAAGTGTTGACTCTTTCTGGATATTATAGTCAGATAATGTGCGTCCATCTTCC 2616 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 | |||||||| || || || | ||||| || ||||| ||||| |||||||| |||||| Sbjct 2617 AATTGCTTACCAGCAAAAATCAAACGTTGCTGATCTGGTGGAATACCTTCTTTATCTTGA 2676 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 ||||| || || ||||| || || |||||| ||| || || | ||||| || || Sbjct 2677 ATTTTAGCTTTTACATTCTCGATAGTATCCGAAGGTTCTACCTCCAAGGTAATAGTTTTC 2736 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCATTT 195142 || || | ||||||||| || | |||||||| Sbjct 2737 CCGGTAAGAGTTTTTACAAAGATTTGCATTT 2767 >seq4449 Length=67262 Score = 100 bits (110), Expect = 6e-16 Identities = 141/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 194943 AGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACC 195002 ||| || |||||||| |||||||| || | || || | |||||||| ||||| || || Sbjct 64478 AGTAGATTCTTTTTGGATATTGTAGTCAGAGAGGGTGCGGCCATCTTCCAGCTGTTTGCC 64419 Query 195003 TGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTT 195062 || || || | || ||||| ||||||||||| || |||||||| ||||| || || Sbjct 64418 AGCAAATATCAAACGCTGTTGATCTGGAGGAATTCCCTCTTTGTCCTGAATCTTGGCTTT 64359 Query 195063 GACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGT 195122 ||| || || || || || || || || ||||| || | || || || || | || Sbjct 64358 GACATTTTCGATAGTATCAGAGGGCTCAACCTCAAGAGTGATGGTTTTGCCCGTTAGGGT 64299 Query 195123 TTTTACGAACACTTGCAT 195140 || ||||| | ||||| Sbjct 64298 CTTAACGAAGATCTGCAT 64281 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1108608301375878