Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ephydra_20gracilis_20[genbank_20GCA_5F001014675.1_202015-05-28]
61,434 sequences; 410,872,512 total letters
Query= NC_015398.1
Length=101487
Score E
Sequences producing significant alignments: (Bits) Value
seq4449 114 8e-21
seq56942 100 2e-16
>seq4449
Length=67262
Score = 114 bits (126), Expect = 8e-21
Identities = 155/216 (72%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 34769 CAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATC 34828
||| ||||| || | || |||||| || || || ||||| || ||| | || ||||
Sbjct 64493 CAACACCAAATGCAAAGTAGATTCTTTTTGGATATTGTAGTCAGAGAGGGTGCGGCCATC 64434
Query 34829 ATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34888
||||||||||| || |||||||| | || || || ||| | || | ||||| |||||
Sbjct 64433 TTCCAGCTGTTTGCCAGCAAATATCAAACGCTGTTGATCTGGAGGAATTCCCTCTTTGTC 64374
Query 34889 GCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGT 34948
|||||| |||||| | | || | ||| || |||||| || | || |||||
Sbjct 64373 CTGAATCTTGGCTTTGACATTTTCGATAGTATCAGAGGGCTCAACCTCAAGAGTGATGGT 64314
Query 34949 TTTTCCCGTGAGAGTCTTCACAAAGATCTGCATATT 34984
||| ||||| || ||||| || ||||||||||| ||
Sbjct 64313 TTTGCCCGTTAGGGTCTTAACGAAGATCTGCATGTT 64278
>seq56942
Length=2534
Score = 100 bits (110), Expect = 2e-16
Identities = 154/218 (71%), Gaps = 4/218 (2%)
Strand=Plus/Minus
Query 34769 CAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATC 34828
|||||||||||||| || ||| || || ||||| ||||| || | | ||| ||||
Sbjct 266 CAAAACCAAGTGAAGCGTCGATTCCTTTTGTATGTTGTAGTCGGACAATGTGCGTCCATC 207
Query 34829 ATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34888
|| |||||||| || || || || || |||||||| ||| |||| | ||||| || ||
Sbjct 206 TTCGAGCTGTTTGCCAGCGAAGATCAGACGTTGCTGATCTGGCGGTATACCCTCTTTATC 147
Query 34889 GCTAATCTTCTGTTTGACGGATGCT--ATCGATTCACCGGCCTCAACATCGACGGTTATG 34946
||| ||| |||||| || || |||| || | ||||| || | || ||
Sbjct 146 TTGAATTTTCGCTTTGAC--ATTCTCAATCGTGTCCGATGGTTCAACTTCCAGCGTAATC 89
Query 34947 GTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATATT 34984
|| || || || || || ||||||||||| ||||| ||
Sbjct 88 GTCTTACCAGTCAGCGTTTTCACAAAGATTTGCATTTT 51
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 324390538099152
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |