Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ephydra_20gracilis_20[genbank_20GCA_5F001014675.1_202015-05-28] 61,434 sequences; 410,872,512 total letters Query= NC_019507.1 Length=182833 Score E Sequences producing significant alignments: (Bits) Value seq60218 188 8e-43 seq60006 136 5e-27 >seq60218 Length=1073 Score = 188 bits (208), Expect = 8e-43 Identities = 211/280 (75%), Gaps = 4/280 (1%) Strand=Plus/Plus Query 100469 TAATTTATTAATAAAAGGCGACAATTTAATTGGCTTACATTCTTTAAAAAAGAAATTTGC 100528 ||||||| | || ||||| | ||| |||||| ||||| || ||||||| | || | Sbjct 121 TAATTTAATCATCAAAGGAAATAATCTAATTGCATTACACTCATTAAAAAC--ACGTTAC 178 Query 100529 GAAT--AAAGTTAAACTTATCTATATTGATCCACCTTATAATACAGGCAATACTAGTTTT 100586 | | ||||| |||||||||||||| ||||| || || |||||||| | ||||| Sbjct 179 GCAGGAAAAGTAAAACTTATCTATATAGATCCCCCATACAATACAGGTTCAGATGGTTTT 238 Query 100587 AATTATAACGACAAATTTAAACACACTACTTGGCTTACTTTTATGAAAAATCGCCTTGAA 100646 | ||||| || |||||||| ||| | |||||| | || || ||||||||||| |||||| Sbjct 239 CAATATAATGATAAATTTAACCACTCAACTTGGTTAACCTTCATGAAAAATCGGCTTGAA 298 Query 100647 ATTGCTAGGGAATTTTTAAGAGATGATGGTGTAATATTCGTTCAATGTGACGATAACGAG 100706 || || ||||| | |||| ||||||||| || || || |||||||| || || || Sbjct 299 ATAGCAAGGGAGCTACTAAGTCATGATGGTGCTATTTTTGTACAATGTGATGACAATGAA 358 Query 100707 CAAGCGTATTTAAAAGTACTTATGGATGATATATTTGGTA 100746 ||||| || ||||||||||| ||||||| | ||||||| Sbjct 359 CAAGCATACTTAAAAGTACTAATGGATGCTTGTTTTGGTA 398 >seq60006 Length=1004 Score = 136 bits (150), Expect = 5e-27 Identities = 216/304 (71%), Gaps = 8/304 (3%) Strand=Plus/Minus Query 100456 TTAAAAATAATCCTAATTTATTAATAAAAGGCGACAATTTAATTGGCTTACATTCTTTAA 100515 |||| ||||| ||| || |||| || || ||||| | |||| ||||||| ||| Sbjct 897 TTAACGATAATGAAAATCTAATAATTAAGGGAAACAATCTCATTGCACTACATTCAATAA 838 Query 100516 AAAAGAAATTTGCGAATAAA--GTTAAACTTATCTATATTGATCCACCTTATAATACAGG 100573 |||| ||||| || | ||| || ||| | || ||||| || ||||||||||||||||| Sbjct 837 AAAA--AATTTACGCAGAAAAAGTGAAATTAATTTATATAGACCCACCTTATAATACAGG 780 Query 100574 CAATACTAGTTTTAATTATAACGACAAATTTAAACACACTACTTGGCTTACTTTTATGAA 100633 ||| |||||||| |||||||| ||| || | | || ||||| || || ||| | Sbjct 779 AAATGACAGTTTTAAATATAACGATCGATTCAATCGATCAACATGGCTGACATTCATGGA 720 Query 100634 AAATCGCCTTGAAATTGCTAGGGAATTTTTAAGAGATGATGGTGTAATATTCGTTCAATG 100693 |||| | ||| | | |||| ||| | | |||||||| | || || ||||||| Sbjct 719 AAATAGGCTTCAGGTAGCTAAAGAAATACTTTCTGATGATGGGTTTATTTTTATTCAATG 660 Query 100694 TGACGATAACGAGCAAGCGTAT-TTAAAAGTACTTATG-GATGATATATTTGGTAGAGAG 100751 ||| ||||| || ||| ||| |||||| | ||||| ||| || ||||| | |||| Sbjct 659 TGATGATAATGAATCAGCATATCTTAAAATT--TTATGCGATTCAATTTTTGGAAAAGAG 602 Query 100752 AATT 100755 |||| Sbjct 601 AATT 598 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 584488411793520