Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ephydra_20gracilis_20[genbank_20GCA_5F001014675.1_202015-05-28] 61,434 sequences; 410,872,512 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq37138 178 7e-40 >seq37138 Length=11844 Score = 178 bits (196), Expect = 7e-40 Identities = 400/596 (67%), Gaps = 15/596 (3%) Strand=Plus/Plus Query 25933 CATAAATAAATCTGGAATCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTT 25992 ||| || | ||| |||||||| | || |||||||| ||||| ||||| ||| ||||| Sbjct 4807 CATGAACAGATCAGGAATCCAGAGGGCGTAAAATAAGTCTCTTGCTCTGTGTTCCTCTTT 4866 Query 25993 TCCGTGATTCTTTTTTAGATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAATA 26052 ||| ||| ||||||| ||||| || || |||||||| || ||||| || ||||| || Sbjct 4867 TCCTGTATTTTTTTTTAAGTCTAAAAACTCGAAAATATCCGAATGCCAAGGCTCTAAGTA 4926 Query 26053 GATAGCAAAACTACCTTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATT 26112 |||||||| ||| |||||||| ||||| || ||||| || | ||| | ||| Sbjct 4927 TATAGCAAACGCACCAGGCCTTTTTCCGCCACCCTGGTCTACATAACGTGCTACATTATT 4986 Query 26113 GAAAACTTTCAACATTGGAACTAATCCAGTTGAAAATCCGTTTGTGCTATGAATCTTG-- 26170 ||| || | ||||| || ||||| ||| | || || || |||| | || ||| Sbjct 4987 GAACACCCTTAACATAGGCACTAAGCCATTAGATGTGCCATTAGTGCC--GCATATTGAT 5044 Query 26171 GATCCTGTCGATCTAATATCGTGAGCATGAATACCGATTCCACCAGCCCATTTTGAAATA 26230 | |||| | | || |||| ||| ||| || || ||||| || || |||| ||||| Sbjct 5045 GTTCCTTTAGCTCGAATACAATGAACATTTATTCCAATTCCTCCCGCTGATTTAGAAATC 5104 Query 26231 GCTGCACAATCTGAAACTGTATCGAAAATTCCTTTTATGCTATCACCTTTCATTCCTAAT 26290 |||||| | | ||||| | |||||||||| || ||| || |||| | Sbjct 5105 ATTGCACACTGTTCAACTGATTTAAAAATTCCTTCAATTGAATCTGCTACCATTGTAAGC 5164 Query 26291 AAAAAACAAGAAGATAATTGCGAATGAGTTGTTCCTGAATTAAATAATGTCGGTGTAGCA 26350 ||||||||||| ||||| || | | ||||| | | |||||| || || | ||| Sbjct 5165 AAAAAACAAGATGATAACTGAGGGCGTCTTGTTGCAGCCGCAAATAAAGTTGGAGAGGCA 5224 Query 26351 TGAGTATAATATCCTTCACTCAAAGC----TGTATAAGTTTCAAGAACTTCATCGATATT 26406 || ||| ||||| ||| | | ||| ||||| ||||||| | ||||||||| Sbjct 5225 TGGGTAAAATAT--TTCTCAGAGAGCAAATTGTAT--GTTTCAATTGCAGCATCGATATC 5280 Query 26407 GTAATTACTAACTTCAATAGCTGTTCTTAACCACATATATTGAGGTCGTTCAATTACATT 26466 | | | | | |||| | | ||| | | |||| | || |||| || | || || Sbjct 5281 TTCACCATGTATTCCAATCGATACTCTCATCAACATGTGCTGTGGTCTCTCCACAACTTT 5340 Query 26467 ATTTTCCGCATCTCTAATCAAATAAGATTTTTCTAAAGTTTTCAATCCAAAATAAT 26522 | || | || ||| |||||| || ||| | ||| || || ||||| |||| Sbjct 5341 ACCTT---TAACTTTAAGCAAATATGAACGTTCAAGAGTCTTAAAGCCAAAGTAAT 5393 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 252850542151550