Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ephydra_20gracilis_20[genbank_20GCA_5F001014675.1_202015-05-28] 61,434 sequences; 410,872,512 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq15355 118 1e-21 >seq15355 Length=37128 Score = 118 bits (130), Expect = 1e-21 Identities = 343/520 (66%), Gaps = 16/520 (3%) Strand=Plus/Minus Query 138183 ACACCAATAGGACCTACGCCAGGACCTCCACCTCCATGTGGAATACAGAATGTCTTATGT 138242 || ||||| || || | ||||||||| || || |||||||| || |||||||| || || Sbjct 27474 ACGCCAATTGGTCCCATGCCAGGACCGCCGCCGCCATGTGGTATGCAGAATGTTTTGTGC 27415 Query 138243 AAATTTAGATGACATACATCTGCACCATAGTCACATGGTTTTGCTAGACCTACCTGTGCA 138302 | ||| | ||| ||||||| ||||| |||| || || |||||||||||| Sbjct 27414 AGATTCAAATGGGATACATCACTGCCATAATCACCGGGGCGACAGAGTCCTACCTGTGCA 27355 Query 138303 TTTAGATTTGCACCATCGAGATATACCTGACCACCATTGTCATGAACGATCTTACATATC 138362 || | |||||| || || ||||| || || || |||| | || | | | ||||| Sbjct 27354 TTCATATTTGCGCCGTCCAGATACACTTGCCCGCCATGCTGGTGTATCAAATCGCATATT 27295 Query 138363 TGTCTGATGTTTGTTTCAAATACACCATGAGTCGATGGATATGTAATCATAATACATGAG 138422 | | | | || || ||||| ||||||||||| |||||||| | ||| || Sbjct 27294 TCTGCAACCGTCTCCTCGAAAACACCCATTGTCGATGGATAAGTAATCATTAGACAGGAC 27235 Query 138423 AGTTCAAATGTATTCATGAT----TGCTTTCTTCTCTAGATCTTTGATGTCTATGTTGCC 138478 ||||| || |||| | |||||| | | || | || || ||| |||| Sbjct 27234 AGTTC----GTTCGCATGTTCAGCTGCTTTGTCGCGCAAATGTGCCATATCGATGCTGCC 27179 Query 138479 ATCATCATCACACTTG-ACACCTACAACTTTCATTCCTGCCATGACTGCACTAGCAGGAT 138537 ||||| | | | | | | | | | |||||||| || ||||| ||| || || | Sbjct 27178 ATCAT-TTAATATTCGTATAGGTTCCACTTTCATGCCAGCCATCTGCGCAGAGGCTGGGT 27120 Query 138538 TAGTTCCATGTGCTGACTCTGGTATCAGACATACATTTCTTTTATCATCTCCT-GATCCT 138596 | || |||||||| || ||||||| ||||| || | | | | || ||| || || Sbjct 27119 TTGTGCCATGTGCAGAAATAGGTATCAAACATATGTTGCGATGACCTTCGCCTCTATGCT 27060 Query 138597 TGATGATA--TGCTTGGATTGCTAACAGTCCTGCATACTCACCCTGTGATCCTGCGTTAG 138654 | ||||| ||| | || || || || ||||||||||| |||| || | ||| | Sbjct 27059 CG-TGATAACTGC--GTATAGCGCGCAAACCAGCATACTCACCTTGTGCGCCAGAGTTCG 27003 Query 138655 GTTGTAATGATATAGAATCAAAACCTGTGATATCACATAA 138694 | || |||||||| |||| | || || || || || || Sbjct 27002 GCTGGAATGATATTTTATCATAGCCGGTTATCTCGCACAA 26963 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578553772653680