Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ephydra_20gracilis_20[genbank_20GCA_5F001014675.1_202015-05-28] 61,434 sequences; 410,872,512 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq28107 107 2e-18 >seq28107 Length=66327 Score = 107 bits (118), Expect = 2e-18 Identities = 141/193 (73%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 175315 CCAGGTACGGGAAAGACCCTCCTCGCCCGAGCCATCGCGGGTGAATCAAATGTCCCATTC 175374 ||||| || || || || | ||||| ||| | ||||| ||| ||||||| || ||| Sbjct 22507 CCAGGCACTGGCAAAACGTTACTCGCTAAAGCGACAGCGGGAGAAGCAAATGTACCGTTC 22566 Query 175375 ATC-CAGTGCTCTGCCGCAAACTTTGTGGAGATGTTTGTTGGTGTGGGTGCCAAAAGGGT 175433 || | ||| |||| | || | ||| |||| |||||||| || || || | | | || Sbjct 22567 ATTACCGTG-TCTGGCTCAGAGTTTTTGGAAATGTTTGTGGGCGTTGGACCGTCACGTGT 22625 Query 175434 TCGCGATCTCTTTGAAATCGCCCGCGAAAATCAACCATGTATTGTCTTCATTGATGAGAT 175493 || ||| | |||| ||| || ||| || || ||||| ||| | |||||||||||||| Sbjct 22626 CCGTGATATGTTTGCAATGGCACGCAAACATGCGCCATGCATTCTTTTCATTGATGAGAT 22685 Query 175494 TGATGCGGTGGGC 175506 ||||||||||||| Sbjct 22686 TGATGCGGTGGGC 22698 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596111479289920