Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ephydra_20gracilis_20[genbank_20GCA_5F001014675.1_202015-05-28] 61,434 sequences; 410,872,512 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq37138 284 1e-71 seq56942 161 9e-35 seq4449 143 2e-29 seq10185 120 3e-22 >seq37138 Length=11844 Score = 284 bits (314), Expect = 1e-71 Identities = 851/1296 (66%), Gaps = 42/1296 (3%) Strand=Plus/Plus Query 138150 AGATTTATCTACAGTAAACTTTATGGCATCAGCGGCTGGTTTCGTTCTCAGATAATACAT 138209 || |||||| |||||||||| ||| |||| |||||||||||| || | || ||||||||| Sbjct 3559 AGGTTTATCAACAGTAAACTGTATTGCATTAGCGGCTGGTTTTGTGCGCAAATAATACAT 3618 Query 138210 TCCCGTTTTTAACCCATTTTCCCAGGCGTACATGTGTATCGAAGTGAGTAACG---CGTA 138266 ||| ||||| | ||| || ||| ||||| | || || || || |||| | || Sbjct 3619 TCCAGTTTTAAGGCCAGATTTCCAAGCGTAGAAATGAATTGATGT---TAACTTTCCATA 3675 Query 138267 AGTCGGTTTCGCCAGAAATATGTTAAACGATTGACTCTGATCGATGAAAGCGCCTCGATC 138326 | |||| || | |||||||| || ||||| ||||| || ||||| |||| ||| Sbjct 3676 GTTGGGTTCTGCAACGTGAATGTTAAAAGACTGACTTTGATCAATAAAAGCTCCTCTATC 3735 Query 138327 AATGGCCATGTTAATTAAATTTTTACTTTTCATCTCCCACACGGTCTTGTATAGATCACG 138386 | ||||| |||||| |||| | || ||||| || |||||||||| ||||| Sbjct 3736 AGCTGCCATTTTAATTGTCGATTTAACTGAAATTTCCCAAACTGTCTTGTATAAGTCACG 3795 Query 138387 AATATGTCGCGGTATTGTTGCAATATTTTGAATGCTCCCGTTGGCCGCAATGATGCGATT 138446 ||| || || ||| | |||||||| || || | | || || |||| Sbjct 3796 AATGGACTTAGGAATAGTTTCTATATTTTGTATAGAACCACGGCTTGATATAATTTGATT 3855 Query 138447 TCTCATGTCATCGTTGTACAGATTCAACTT-GATCAAGTCGTTTATCAGATATCTGTTTA 138505 | |||||| || | | | |||||| || | | | || | | || | || | Sbjct 3856 TTTCATGTTGTCATCCCATA-ATTCAAGTTCGGTTAGATCTCTGAGAAGGTGATGATTAA 3914 Query 138506 TGACCTGAAATTCACCGGCCAATACTCGACGAACGTAAATGTTGTTGGTGAAAGGCTCAA 138565 || || |||||||| | || || || | ||| || || || |||| |||| Sbjct 3915 CAACTTGGAATTCACCAGATAAAACACGCCTGGTGTATATATTAGAAGTATAAGGTTCAA 3974 Query 138566 ACGATTCGTTGTTTCCCAGAATCTGAGCCGTGGTCGCGGTCGGCATGTACGCCACCAAAA 138625 | ||||| || || || ||||| ||||| || | || || |||||| || || | | Sbjct 3975 AGGATTCATTATTCCCAAGAATTTGAGCTGTTGATGCTGTAGGCATGGGAGCAACAAGTA 4034 Query 138626 GAGAATTCCGTAAACCGTGAAGCTTGA-TTCGTTCCTTGAGCGACGACCAGTCCCACAAA 138684 |||||| |||| || | | |||| ||| ||||| | | ||| |||||||| Sbjct 4035 AAGAATTTCGTATGCCAT-ACTTTTGAATTCTCTCCTTTAAAGCATTCCAATCCCACAAG 4093 Query 138685 TCGCTAGGTTTTTTGTTCCACATATCGTACTGTAACATTCCCAAACTTGCGGGACTGCCT 138744 | | || | |||||||| ||||| ||||| || || ||| | ||||| ||| Sbjct 4094 TTTGTTGGCGTAACATTCCACATGTCGTATTGTAATATGCCTTTGCTTACAGGACTCCCT 4153 Query 138745 TCGTACGAATCGTATACACCAAACTCTTGCGCCAACTCGTTGCTCGCCTCGAGCGCACCA 138804 || || || || || ||| ||| ||| ||| || || ||| ||||| | || ||| Sbjct 4154 TCATATGATTCATAAGGACCGAACACTTCCGCTAATTCACAGCTTGCCTCTAATGCTCCA 4213 Query 138805 TAGTAAATAGTTTCGGCAATCTGCTGATTGAGCAATCGGGCCTCGGCGCTCTCGTACGGC 138864 ||||| || ||||| || || ||| ||||| || | |||| || || || Sbjct 4214 TAGTAGATTGTTTCAAATATTTGTATATTTAGCAAATATGCTTGCTCGCTTTCATATGGA 4273 Query 138865 ATGCGGAGCATCGTGAACGCGTCGGCCAGCCCTTGCACGCCCACTCCGACAGGGCGATGG 138924 || | || | | || || || | || || || || | ||| | || ||||| Sbjct 4274 TAACGCATCAGTATAAGTGCATCTGCAAAACCCTGAACTCCAATTCCTATGGGTCGATGC 4333 Query 138925 CGCAGATTTGACGCTTTTGCGGCTTCG---ATAGGATAATAGTTTACATCGATGATTTTG 138981 | || ||| || ||| |||||| | ||||||||| |||| ||| |||||||| Sbjct 4334 CTCATATTAGA---TTTCTTGGCTTCAGGAAGAGGATAATAATTTATATCTATGATTTTA 4390 Query 138982 TTTAAATTTCGCACGACCACCTTAGTCGTA-TGCTTTAATCGTTC-AAAATCGTATGTGC 139039 || |||||| || ||||| || | |||||| | || |||||| || | Sbjct 4391 TTCAAATTTTTTGTAACAGTTTTAGT--TACTTCTTTAAGCTTTTGAAAATCATAAGAC- 4447 Query 139040 CCCCGTTGTCGTCGACGACGTCGACAAATTTGTTGACACAAATCGAGGCTATGTTGCACA 139099 || | | | || | ||| |||| | | ||| || |||| ||||| | Sbjct 4448 -----TTAT--TAGCAGAAATGAACA----TGTTAAGAGCAATAGATGCTAGATTGCAAA 4496 Query 139100 CCGCCACTTCGTCGGGGTCGCTG--TATTCGACAATTTCGGCACACAAATTACTACACTT 139157 | || | || || || ||||| |||||||||||||| | ||||||||| || || || Sbjct 4497 CGGCTATCTCATCTGG--CGCTGAATATTCGACAATTTCAGTACACAAATTGCTGCATTT 4554 Query 139158 GATCGTACCTAAATTTTGTTGATTGCTTTTTCGGTTACAAGCATCTTTGTAAAGCATATA 139217 ||| ||||| | ||||| |||||| ||||||| |||||||| ||| || || | |||||| Sbjct 4555 GATGGTACCAATATTTTTTTGATTACTTTTTCTGTTACAAGAATCCTTATACAACATATA 4614 Query 139218 CGGTGTGCCAGTTTCCACTTGTGTCTCTATAATGAATTTGAAC--AAGTCCCT-AGCTTG 139274 |||||| || ||||| ||||| | || ||||| ||| |||| || ||||| Sbjct 4615 CGGTGTTCCTGTTTCTACTTGGG---CTTCAATGATAGCAAACCAAAGTGACTGAGCTTT 4671 Query 139275 TATTTGACGCACGTAAAGTTCGTCGCGCTCGTACTTTTCGTAGAGTTCGTCGAATCGTTC 139334 |||| | | || | | || || || ||||| || | || || ||| ||| Sbjct 4672 AATTTTCCTATTGAAACGGCCTTCTTTTTCATATTTTTCATATAACTCTTCAAATTCTTC 4731 Query 139335 ACCGTAGGCGTCAGAAAGATCGCGACACTTGTCAGGACACATGAGCGACCATACGCCGTT 139394 || | | ||| ||| | |||| |||| |||||||| || ||||| |||| | Sbjct 4732 TCCCCAAACTTCATCAAGCCCTGGACATTTGTGGGGACACATAAGTGACCAGTCGCCATC 4791 Query 139395 CGCCTTGACGCGCCTCATGAACAGATCCGGAATCCA 139430 | | ||||| |||||||||||||| |||||||| Sbjct 4792 AGATTCTACGCGTCTCATGAACAGATCAGGAATCCA 4827 >seq56942 Length=2534 Score = 161 bits (178), Expect = 9e-35 Identities = 174/228 (76%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| |||||| | |||||||| || ||||| || |||||||| ||||| ||| | | Sbjct 54 ATGCAAATCTTTGTGAAAACGCTGACTGGTAAGACGATTACGCTGGAAGTTGAACCATCG 113 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || ||| || || ||||| ||||| || ||||| || ||||| Sbjct 114 GACACGATTGAGAATGTCAAAGCGAAAATTCAAGATAAAGAGGGTATACCGCCAGATCAG 173 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACAT-GTCAGATTATAA 24882 |||||| ||||||| || || |||||||| || ||| || |||| ||| || || || Sbjct 174 CAACGTCTGATCTTCGCTGGCAAACAGCTCGAAGATG-GACGCACATTGTCCGACTACAA 232 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 ||| |||||||||||||| || |||||||| ||||| |||| || || Sbjct 233 CATACAAAAGGAATCGACGCTTCACTTGGTTTTGCGTCTGCGTGGCGG 280 >seq4449 Length=67262 Score = 143 bits (158), Expect = 2e-29 Identities = 169/229 (74%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| |||| || ||||| || ||||| || || || || || || || | Sbjct 64281 ATGCAGATCTTCGTTAAGACCCTAACGGGCAAAACCATCACTCTTGAGGTTGAGCCCTCT 64340 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || | |||| || ||| ||||| || |||||||| ||||| ||||| |||||| Sbjct 64341 GATACTATCGAAAATGTCAAAGCCAAGATTCAGGACAAAGAGGGAATTCCTCCAGATCAA 64400 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || |||||||| ||||| || ||||||||||| ||| | | | | || || || || Sbjct 64401 CAGCGTTTGATATTTGCTGGCAAACAGCTGGAAGATGGCCGCACCCTCTCTGACTACAAT 64460 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGCG 24932 || ||||| ||||| || | || ||||||||||| | || || |||| Sbjct 64461 ATCCAAAAAGAATCTACTTTGCATTTGGTGTTGCGTCTACGTGGTGGCG 64509 >seq10185 Length=35228 Score = 120 bits (132), Expect = 3e-22 Identities = 165/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| |||||| | ||||| || ||||| ||||||||||| | || |||||| | | Sbjct 2765 ATGCAAATCTTTGTAAAAACTCTTACCGGGAAAACTATTACCTTGGAGGTAGAACCTTCG 2706 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || | || | |||||| || || ||||| |||||||| || || || ||||| Sbjct 2705 GATACTATCGAGAATGTAAAAGCTAAAATTCAAGATAAAGAAGGTATTCCACCAGATCAG 2646 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACA-TGTCAGATTATAA 24882 ||||||||||| ||||| || || || |||| || | || ||| | || || ||||| Sbjct 2645 CAACGTTTGATTTTTGCTGGTAAGCAATTGGAAGA-TGGACGCACATTATCTGACTATAA 2587 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 || || || || || ||||| || ||||| | || || || || || Sbjct 2586 TATCCAGAAAGAGTCAACACTTCATCTGGTGCTCCGCTTACGTGGTGG 2539 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449552112385520