Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ephydra_20gracilis_20[genbank_20GCA_5F001014675.1_202015-05-28] 61,434 sequences; 410,872,512 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq4449 95.1 8e-15 seq56942 87.8 1e-12 >seq4449 Length=67262 Score = 95.1 bits (104), Expect = 8e-15 Identities = 136/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 34787 TCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAG 34846 || || || || || ||||| || ||| |||| |||| ||||| || || || || || Sbjct 64471 TCTTTTTGGATATTGTAGTCAGAGAGGGTGCGGCCATCTTCCAGCTGTTTGCCAGCAAAT 64412 Query 34847 ATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGAT 34906 |||| || || || ||| | || | ||||| ||||| | || || |||||| | Sbjct 64411 ATCAAACGCTGTTGATCTGGAGGAATTCCCTCTTTGTCCTGAATCTTGGCTTTGACATTT 64352 Query 34907 GCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACA 34966 | || | ||| || ||| || |||| || ||||| || ||||| |||||||| || Sbjct 64351 TCGATAGTATCAGAGGGCTCAACCTCAAGAGTGATGGTTTTGCCCGTTAGGGTCTTAACG 64292 Query 34967 AAGATCTGCATG 34978 |||||||||||| Sbjct 64291 AAGATCTGCATG 64280 >seq56942 Length=2534 Score = 87.8 bits (96), Expect = 1e-12 Identities = 147/211 (70%), Gaps = 4/211 (2%) Strand=Plus/Minus Query 34769 ACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCC 34828 |||| ||||| || ||||| || ||||| ||||| || | |||| |||| || Sbjct 262 ACCAAGTGAAGCGTCGATTCCTTTTGTATGTTGTAGTCGGACAATGTGCGTCCATCTTCG 203 Query 34829 AGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTT 34888 || || || || ||||||||||| |||||||| ||| |||| | ||||| || || | Sbjct 202 AGCTGTTTGCCAGCGAAGATCAGACGTTGCTGATCTGGCGGTATACCCTCTTTATCTTGA 143 Query 34889 ATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGACATCAACGGTTATGGTCT 34946 ||||| |||||| || || |||| || | || || || | || || |||| Sbjct 142 ATTTTCGCTTTGAC--ATTCTCAATCGTGTCCGATGGTTCAACTTCCAGCGTAATCGTCT 85 Query 34947 TTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 | || || || || || |||||||| ||||| Sbjct 84 TACCAGTCAGCGTTTTCACAAAGATTTGCAT 54 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325448945047646