Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ephydra_20gracilis_20[genbank_20GCA_5F001014675.1_202015-05-28] 61,434 sequences; 410,872,512 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq4449 168 5e-37 seq56942 165 6e-36 >seq4449 Length=67262 Score = 168 bits (186), Expect = 5e-37 Identities = 171/220 (78%), Gaps = 2/220 (1%) Strand=Plus/Minus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||||| ||||||||| | || ||||||||||| || || || || | | |||||| Sbjct 64496 ACGCAACACCAAATGCAAAGTAGATTCTTTTTGGATATTGTAGTCAGAGAGGGTGCGGCC 64437 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| || || |||||||||||| ||||||| | || ||||| || ||||| |||||||| Sbjct 64436 ATCTTCCAGCTGTTTGCCAGCAAATATCAAACGCTGTTGATCTGGAGGAATTCCCTCTTT 64377 Query 29691 GTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTA 29749 ||| || ||| || | ||||||| |||| | ||| ||||| | || || |||||||| | Sbjct 64376 GTCCTG-AATCTTGGCTTTGACATTTTCGATAGTATCAGAGGGCTCAACCTCAAGAGTGA 64318 Query 29750 TAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTT 29789 | |||||||| |||| ||| ||||| || |||||||| || Sbjct 64317 TGGTTTTGCCCGTTAGGGTCTTAACGAAGATCTGCATGTT 64278 >seq56942 Length=2534 Score = 165 bits (182), Expect = 6e-36 Identities = 179/232 (77%), Gaps = 4/232 (2%) Strand=Plus/Minus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCG-C 29618 || || | || ||||| ||||| |||||||| ||||| ||||| ||||| || || | | Sbjct 280 CCGCCACGCAGACGCAAAACCAAGTGAAGCGTCGATTCCTTTTGTATGTTGTAGTCGGAC 221 Query 29619 AATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGG 29678 |||| |||| ||| ||||| ||||||||||| | |||| | ||||||||| ||||| Sbjct 220 AATG-TGCGTCCATCTTCGAGCTGTTTGCCAGCGAAGATCAGACGTTGCTGATCTGGCGG 162 Query 29679 AATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTA 29737 ||||||||||| ||||| |||||| | ||||||| | || | ||||| || |||| | Sbjct 161 TATACCCTCTTTATCTTG-AATTTTCGCTTTGACATTCTCAATCGTGTCCGATGGTTCAA 103 Query 29738 CTTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTT 29789 |||| || || || || || ||||| | ||||| ||||| || |||||||| Sbjct 102 CTTCCAGCGTAATCGTCTTACCAGTCAGCGTTTTCACAAAGATTTGCATTTT 51 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 384930776032194