Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ephydra_20gracilis_20[genbank_20GCA_5F001014675.1_202015-05-28] 61,434 sequences; 410,872,512 total letters Query= NC_024446.1 Length=306862 Score E Sequences producing significant alignments: (Bits) Value seq56942 167 5e-36 seq4449 156 8e-33 seq10185 152 1e-31 >seq56942 Length=2534 Score = 167 bits (184), Expect = 5e-36 Identities = 176/232 (76%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 82583 ACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGA 82642 ||| || | || ||||| ||| ||||| || || ||||| || ||||| || || || || Sbjct 281 ACCGCCACGCAGACGCAAAACCAAGTGAAGCGTCGATTCCTTTTGTATGTTGTAGTCGGA 222 Query 82643 TAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGG 82702 | | | || ||||| || ||||| ||||| ||||| || | ||| |||||||| || Sbjct 221 CAATGTGCGTCCATCTTCGAGCTGTTTGCCAGCGAAGATCAGACGTTGCTGATCTGGCGG 162 Query 82703 TATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTAC 82762 ||| || || ||||||||||| || ||||| ||||| |||||||| || ||||| || Sbjct 161 TATACCCTCTTTATCTTGAATTTTCGCTTTGACATTCTCAATCGTGTCCGATGGTTCAAC 102 Query 82763 TTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCATTATT 82814 ||||| || |||||||| || |||| ||| || ||||| || |||||| || Sbjct 101 TTCCAGCGTAATCGTCTTACCAGTCAGCGTTTTCACAAAGATTTGCATTTTT 50 >seq4449 Length=67262 Score = 156 bits (172), Expect = 8e-33 Identities = 164/216 (76%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 82595 ACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACC 82654 ||||| || || |||| |||||||||||| || ||||| || ||||| || | | || Sbjct 64496 ACGCAACACCAAATGCAAAGTAGATTCTTTTTGGATATTGTAGTCAGAGAGGGTGCGGCC 64437 Query 82655 GTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTT 82714 ||||| || ||||| |||||||| || | | |||||||||||||| ||||| || || Sbjct 64436 ATCTTCCAGCTGTTTGCCAGCAAATATCAAACGCTGTTGATCTGGAGGAATTCCCTCTTT 64377 Query 82715 ATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTAT 82774 || |||||||| ||||| |||||||| || |||||| || || || || | ||| || Sbjct 64376 GTCCTGAATCTTGGCTTTGACATTTTCGATAGTATCAGAGGGCTCAACCTCAAGAGTGAT 64317 Query 82775 CGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 || ||||| || | ||||| || || |||||||| Sbjct 64316 GGTTTTGCCCGTTAGGGTCTTAACGAAGATCTGCAT 64281 >seq10185 Length=35228 Score = 152 bits (168), Expect = 1e-31 Identities = 156/204 (76%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 82608 TGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGT 82667 || || || || |||||||| |||||||| ||||||| | | || ||||| | ||| Sbjct 2563 TGAAGTGTTGACTCTTTCTGGATATTATAGTCAGATAATGTGCGTCCATCTTCCAATTGC 2622 Query 82668 TTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTT 82727 || |||||||| || | | ||| |||||||| || || ||||| ||||||||||| || Sbjct 2623 TTACCAGCAAAAATCAAACGTTGCTGATCTGGTGGAATACCTTCTTTATCTTGAATTTTA 2682 Query 82728 GCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTC 82787 ||||||||||| || || ||||| ||||||||| ||||| || || || || || || Sbjct 2683 GCTTTTACATTCTCGATAGTATCCGAAGGTTCTACCTCCAAGGTAATAGTTTTCCCGGTA 2742 Query 82788 AACGTCTTTACAAATATCTGCATT 82811 | || |||||||| || |||||| Sbjct 2743 AGAGTTTTTACAAAGATTTGCATT 2766 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 981054381106126