Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ephydra_20gracilis_20[genbank_20GCA_5F001014675.1_202015-05-28] 61,434 sequences; 410,872,512 total letters Query= NC_026268.1 Length=139132 Score E Sequences producing significant alignments: (Bits) Value seq56942 120 3e-22 seq10185 98.7 9e-16 seq4449 89.7 5e-13 >seq56942 Length=2534 Score = 120 bits (132), Expect = 3e-22 Identities = 160/218 (73%), Gaps = 6/218 (3%) Strand=Plus/Plus Query 25172 AACATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCC 25231 || |||||| | ||||| ||||| | || || || |||| ||| | ||||| ||| || Sbjct 51 AAAATGCAAATCTTTGTGAAAACGCTGACTGGTAAGACGATTACGCTGGAAGTTGAA-CC 109 Query 25232 AACG-ATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGA 25290 | || | || || ||| | || ||| |||||| |||||||||||||||||||| || Sbjct 110 ATCGGACACGATTGAGAATGTCAAAGCGAAAATTCAAGATAAAGAGGGTATACCGCCAGA 169 Query 25291 TCAGCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAG--AAATGTCAGCGAT 25348 ||||||| | || || | || |||||||| |||||||||| | | |||| ||| Sbjct 170 TCAGCAACGTCTGATCTTCGCTGGCAAACAGCTCGAAGATGGACGCACATTGTC--CGAC 227 Query 25349 TACAATATTCAAAAAGAATCCACCATTCATTTAGTGTT 25386 ||||| || ||||| ||||| || |||| || || || Sbjct 228 TACAACATACAAAAGGAATCGACGCTTCACTTGGTTTT 265 >seq10185 Length=35228 Score = 98.7 bits (108), Expect = 9e-16 Identities = 152/217 (70%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 25168 AAACAACATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGA 25227 |||||| |||||| | ||||||||||| | ||||| ||| | || || | || || || Sbjct 2772 AAACAAAATGCAAATCTTTGTAAAAACTCTTACCGGGAAAACTATTACCTTGGAGGTAGA 2713 Query 25228 AGCCAACGATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCC 25287 | | |||||||||||| | |||||| |||||| |||||||| ||||| || || Sbjct 2712 ACCTTCGGATACTATCGAGAATGTAAAAGCTAAAATTCAAGATAAAGAAGGTATTCCACC 2653 Query 25288 CGATCAGCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGA 25347 ||||||||| | | |||| | || || ||| | ||||||| | | | || Sbjct 2652 AGATCAGCAACGTTTGATTTTTGCTGGTAAGCAATTGGAAGATGGACGCACATTATCTGA 2593 Query 25348 TTACAATATTCAAAAAGAATCCACCATTCATTTAGTG 25384 || ||||| || ||||| || || ||||| | ||| Sbjct 2592 CTATAATATCCAGAAAGAGTCAACACTTCATCTGGTG 2556 >seq4449 Length=67262 Score = 89.7 bits (98), Expect = 5e-13 Identities = 151/219 (69%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 25168 AAACAACATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGA 25227 |||||||||||| | || || || || |||| || ||| | ||||| | || || || Sbjct 64274 AAACAACATGCAGATCTTCGTTAAGACCCTAACGGGCAAAACCATCACTCTTGAGGTTGA 64333 Query 25228 AGCCAACGATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCC 25287 || ||||||||||| | || ||| || ||| || |||||||| || || || Sbjct 64334 GCCCTCTGATACTATCGAAAATGTCAAAGCCAAGATTCAGGACAAAGAGGGAATTCCTCC 64393 Query 25288 CGATCAGCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGA 25347 ||||| || | | || | | |||||||| || ||||||| | | || || Sbjct 64394 AGATCAACAGCGTTTGATATTTGCTGGCAAACAGCTGGAAGATGGCCGCACCCTCTCTGA 64453 Query 25348 TTACAATATTCAAAAAGAATCCACCATTCATTTAGTGTT 25386 |||||||| ||||||||||| || | ||||| ||||| Sbjct 64454 CTACAATATCCAAAAAGAATCTACTTTGCATTTGGTGTT 64492 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 444752600882880