Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ephydra_20gracilis_20[genbank_20GCA_5F001014675.1_202015-05-28] 61,434 sequences; 410,872,512 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq27183 125 8e-24 >seq27183 Length=12736 Score = 125 bits (138), Expect = 8e-24 Identities = 214/308 (69%), Gaps = 2/308 (1%) Strand=Plus/Plus Query 146840 TGAAATCGTCTATGTCCTCCACCCGCCTCAAAATCTTGAGCTTGGGGAAGGGTCGGGGGT 146899 ||||||| || || | ||| ||| ||| ||| | ||||| ||||| |||| || | Sbjct 6207 TGAAATCCTCAATATGCTCTACCTGCCGTTTAATGATTAGCTTTGGGAAAGGTCTTGGTT 6266 Query 146900 TCCTGGCCAGCTGAATTTTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCA 146959 | | | ||| || ||| || || || ||||| || ||||||||||| || || | Sbjct 6267 TGCGGACCAATTGCTCTTTGAGCGGTTCAACGTGATTTTTGTAGACGTGCGTATCGCCGA 6326 Query 146960 GGGTGTGCACAAAGTCCCCCGGCTTAAGGCCGGTCACGTGGGCCACCATGTAGGTGAGCA 147019 |||||||||||||||| || ||||| | ||| || | ||| || | ||| || || | | Sbjct 6327 GGGTGTGCACAAAGTCGCCGGGCTTCAAGCCTGTGATGTGCGCTATCATATATGTTAATA 6386 Query 147020 GCGAGTAGCTGGCTATGTTGAAGGGGACCCCCAGGCCCATGTCCCCCGACCTCTGGTACA 147079 ||| || ||| || |||||||| || |||| ||||| || | | ||| |||| Sbjct 6387 GCGCATAAGAGGCAATATTGAAGGGCACGCCCAAACCCATATCGGCGCTGCGCTGATACA 6446 Query 147080 GCTGGCACGAGAGCTCCCCGTCGGCCACGTAAAACTG-GCACAGGATGTGGCACGGCGGC 147138 ||| ||||| ||||| || | | ||| | || || || | | ||| || |||||| Sbjct 6447 ACTGACACGATAGCTCACCATTAGACACAAAGAATTGTGCTAAACA-GTGACATGGCGGC 6505 Query 147139 AGCGCCAT 147146 | |||||| Sbjct 6506 AACGCCAT 6513 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583039924977600