Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ephydra_20gracilis_20[genbank_20GCA_5F001014675.1_202015-05-28] 61,434 sequences; 410,872,512 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq4449 107 2e-18 seq56942 95.1 1e-14 seq32255 91.5 1e-13 >seq4449 Length=67262 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||||| | |||||||||||| || ||| || ||||| || ||||| || | Sbjct 64507 CCACCACGTAGACGCAACACCAAATGCAAAGTAGATTCTTTTTGGATATTGTAGTCAGAG 64448 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | ||| || | || |||||||| || || ||||||||||| ||||| || || | |||| Sbjct 64447 AGGGTGCGGCCATCTTCCAGCTGTTTGCCAGCAAATATCAAACGCTGTTGATCTGGAGGA 64388 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689 | | ||| |||||| ||||| || | | || | | || || | || ||| Sbjct 64387 ATTCCCTCTTTGTCCTGAATCTTGGCTTTGACATTTTCGATAGTATCAGAGGGCTCAACC 64328 Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 || | ||||| ||||| ||||| | || || || || |||||||| Sbjct 64327 TCAAGAGTGATGGTTTTGCCCGTTAGGGTCTTAACGAAGATCTGCAT 64281 >seq56942 Length=2534 Score = 95.1 bits (104), Expect = 1e-14 Identities = 160/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 || ||||| | | ||| ||||| || | ||| |||||||| |||||||| |||| | Sbjct 280 CCGCCACGCAGACGCAAAACCAAGTGAAGCGTCGATTCCTTTTGTATGTTGTAGTCGGAC 221 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 || || || | || || ||||| || || || || |||| || ||||| || | || Sbjct 220 AATGTGCGTCCATCTTCGAGCTGTTTGCCAGCGAAGATCAGACGTTGCTGATCTGGCGGT 161 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTC-AGAGTTGCCACCGTGTCGCTCGATTCCAC 35688 | | ||| || || ||| ||| |||| | | | | | |||||| | ||| || Sbjct 160 ATACCCTCTTTATCT-TGAATTTTCGCTTTGACATTCTCAATCGTGTCCGATGGTTCAAC 102 Query 35689 CTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATT 35737 |||| ||| ||||| ||||| |||| ||||||||||| || |||||| Sbjct 101 TTCCAGCGTAATCGTCTTACCAGTCAGCGTTTTCACAAAGATTTGCATT 53 >seq32255 Length=22131 Score = 91.5 bits (100), Expect = 1e-13 Identities = 179/262 (68%), Gaps = 2/262 (1%) Strand=Plus/Plus Query 44129 TTTGTGGAACGCTGCCCAAACACAACTGTTGCGAGAAGGTAAAATGCACCAATACATGCG 44188 ||| ||||| | || ||| || || |||| || || ||||||||| | |||| Sbjct 3514 TTTATGGAATTCCGCACAATTGCAGTTGGTGCGCGAGGGCAAAATGCACGGGTTTTTGCG 3573 Query 44189 TATGTATTGGTGCAAGAAGATATTGGAGTGGTCGGAAGATGCGCAAACCGCGCTCGTTCA 44248 ||||||||| |||||||| | || ||| | ||| || || || || | | Sbjct 3574 CATGTATTGGGCGAAGAAGATTCTCGAATGGACAGAATCGCCGGAACAGGCACTGGAGTA 3633 Query 44249 TGCCATCTATCTGAACGACAAGTACAGTTTGGACGGTCGCGACCCCAACGGGTACGTAGG 44308 ||||| | |||| ||||| || || || || || ||||| || | || || || || Sbjct 3634 CGCCATTTTGTTGAATGACAAATATAGCTTAGATGGACGCGATCCAAGTGGCTATGTTGG 3693 Query 44309 ATGTATGTGGTCCATTTGCGGTGTCCACGA-CAGGGCGTGGCGAGAGCTACCCATCTACG 44367 ||||||||||||||| |||| || || || |||||| ||| |||| |||||| || Sbjct 3694 CTGTATGTGGTCCATTGGCGGAGTGCATGACCAGGGC-TGGGCTGAGCGTGCCATCTTCG 3752 Query 44368 GCAAAGTGCGCTACATGAACTA 44389 | || | || | |||||| || Sbjct 3753 GTAAGATACGTTTCATGAATTA 3774 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450447424324720