Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ephydra_20gracilis_20[genbank_20GCA_5F001014675.1_202015-05-28] 61,434 sequences; 410,872,512 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq56942 159 3e-34 seq37138 149 6e-31 seq4449 131 2e-25 seq10185 118 1e-21 seq2705 89.7 5e-13 >seq56942 Length=2534 Score = 159 bits (176), Expect = 3e-34 Identities = 168/221 (76%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555 || ||||| || | ||| ||||| ||||||||||| |||||||||||| | ||| | Sbjct 271 AGACGCAAAACCAAGTGAAGCGTCGATTCCTTTTGTATGTTGTAGTCGGACAATGTGCGT 212 Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615 || |||||||||||||| || || |||| ||| |||||||| |||||||| || ||| Sbjct 211 CCATCTTCGAGCTGTTTGCCAGCGAAGATCAGACGTTGCTGATCTGGCGGTATACCCTCT 152 Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675 || ||||||||||| |||||| || | ||||| || | ||| || || || ||| Sbjct 151 TTATCTTGAATTTTCGCTTTGACATTCTCAATCGTGTCCGATGGTTCAACTTCCAGCGTA 92 Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTT 134716 || || ||||| || | ||||| || || ||||||||||| Sbjct 91 ATCGTCTTACCAGTCAGCGTTTTCACAAAGATTTGCATTTT 51 >seq37138 Length=11844 Score = 149 bits (164), Expect = 6e-31 Identities = 859/1365 (63%), Gaps = 20/1365 (1%) Strand=Plus/Minus Query 7564 CAACACATGCTGTTGCGCGTGGCGGTGGGCATTCACGGCGAAGACATTGACGCCGCCTTG 7623 || |||||| || || | || || | || || || || ||||| || || || || | Sbjct 5322 CAGCACATGTTGATGAGAGTATCGATTGGAATACATGGTGAAGATATCGATGCTGCAATT 5263 Query 7624 GAAACGTACCAAATGATGTCTTTGAAACAGTTTACGCACGCTTCGCCCACCATGTTTGCC 7683 ||||| ||| | || | ||| |||| | ||||| || || || || || | ||||| Sbjct 5262 GAAACATACAATTTGCTCTCTGAGAAATATTTTACCCATGCCTCTCCAACTTTATTTGCG 5203 Query 7684 GCGGGCACAA-ACGCGCCTCAATTGTCCTCGTGTTTTTTGCTAACCATGCGCGAAGACAG 7742 || | |||| |||| ||||| || || || ||||||||||| || ||| | ||| Sbjct 5202 GCTGCAACAAGACGC-CCTCAGTTATCATCTTGTTTTTTGCTTACAATGGTAGCAGATTC 5144 Query 7743 CATCGACGGCATTTACAACAC-GCTGCGCGATTGCGCCAATATTTCCAAATACGGCGGCG 7801 || || || |||| || | | || | | || || | ||||| |||| | || | Sbjct 5143 AATTGAAGGAATTTTTAAATCAGTTGAAC-AGTGTGCAATGATTTCTAAATCAGCGGGAG 5085 Query 7802 GAATAGGTCTGAACGTAAACGACGTGCGCGCCAACGGTAGCCGCATCGTGTC-CACCAAC 7860 |||| || | || || | | || || || || | | || || ||| || Sbjct 5084 GAATTGGAATAAATGTTCATTGTATTCGAGCTAAAGGAA-CATCAATATGCGGCACTAAT 5026 Query 7861 GGAAAAGCCAGCGGTTTAGAGCCCATGTTGCGCGTGTTCAATAACGCGGTGCGACATGTA 7920 || | | | | || |||| ||| ||||| | ||||||||||| | | || ||||| Sbjct 5025 GGCACATCTAATGGCTTAGTGCCTATGTTAAGGGTGTTCAATAATGTAGCACGTTATGTA 4966 Query 7921 GACCAGGGGGG---AAAGCGCAAAGGCGCCGCTGCCATCTATTTGGAGCCGTGGCACGCG 7977 |||||||| || ||| | || || ||| || || || ||||| ||||| || Sbjct 4965 GACCAGGGTGGCGGAAAAAGGCCTGGTGCGTTTGCTATATACTTAGAGCCTTGGCATTCG 4906 Query 7978 GACATTTACGCAGTGCTAAATCTGCGTCGCAACATGGGTTGCGAAGACAGCAAAGCGCGC 8037 || |||| || | || | | || | || || || || ||| | Sbjct 4905 GATATTTTCGAGTTTTTAGACTTAAAAAAAAATACAGGAAAAGAGGAACACAGAGCAAGA 4846 Query 8038 GATCTATTCTTCGGATTGTGGGTGCCCGATCTGTTTATGAGGCGCGTTCATTTCGACGCA 8097 || |||| | || | ||| | || |||||||| ||||| ||||| | | || | Sbjct 4845 GACTTATTTTACGCCCTCTGGATTCCTGATCTGTTCATGAGACGCGTAGAATCTGATGGC 4786 Query 8098 CAATGGTCGCTCATGTGCCCCGATCGTTGCCCTTTATTAAAAAACGTTTACGGTTCAAAA 8157 | ||||| || ||||| ||| | || || | | | |||| || | || Sbjct 4785 GACTGGTCACTTATGTGTCCCCACAAATGTCCAGGGCTTGATGAAGTTTGGGGAGAAGAA 4726 Query 8158 TTTGAACAATTGTACAAACAATACGAACACGACGGCGCGTACGTGCGGCAAGTGAAAGCG 8217 |||||| | || || || |||| ||| | || ||| | | || || | ||||| Sbjct 4725 TTTGAAGAGTTATATGAAAAATATGAAAAAGAAGGCCGTTTCAATAGGAAAATTAAAGCT 4666 Query 8218 CGCGACCTGCACCGCGCCATTATCGAATGTCAAAACGAAACCGGTATGCCGTACATGCTG 8277 | || || || || ||| ||| ||||| || | ||||| ||| || Sbjct 4665 CAGTCACTTTGGTTTGCTATCATTGAAGCCCAAGTAGAAACAGGAACACCGTATATGTTG 4606 Query 8278 TACAAAGACGCTTGCAACGCCAAAAGCAATCAAAGCAACGTGGGCACCATTTGTTGCAGC 8337 || || || |||| ||| ||||| ||||||| || | || ||||| |||||| Sbjct 4605 TATAAGGATTCTTGTAACAGAAAAAGTAATCAAAAAAATATTGGTACCATCAAATGCAGC 4546 Query 8338 AATCTGTGCGCTGAAATTGTACAGTACAGCGCGCCCGACGAAGTGGCCGTTTGCAATCTA 8397 ||| |||| |||||||||| | || ||||| || || | ||||||||||||||| Sbjct 4545 AATTTGTGTACTGAAATTGTCGAATATTCAGCGCCAGATGAGATAGCCGTTTGCAATCTA 4486 Query 8398 GCGTCGGTGTGTTTAAACGCGTTCGTTGATCGACGCTCA-AACACTTACGACTTTGAACA 8456 || || | | | ||| |||| || | ||| | || |||| || ||| || | Sbjct 4485 GCATCTATTGCTCTTAACATGTTCATTTCT----GCTAATAAGTCTTATGATTTTCAAAA 4430 Query 8457 ATTGAAAAACGCCGTGCAAGTGACGGT---ACGCAATTTAGATCGCATCATTGATGTCAA 8513 | ||| | | || || || | ||||| || ||||| ||| | || Sbjct 4429 GCTTAAAGAAGTAACTAAA---ACTGTTACAAAAAATTTGAATAAAATCATAGATATAAA 4373 Query 8514 TTTTTATCCCTTGGAAGAAGCGCGCGTATCGAACATGCGCCACAGACCCGTTGGCGTGGG 8573 || |||||| | ||||| ||| || ||| | || ||||| | || | || Sbjct 4372 TTATTATCCTCTTCCTGAAGCCAAGAAATCTAATATGAGGCATCGACCCATAGGAATTGG 4313 Query 8574 CGTGCAAGGTCTGGCCGACGCGTTTGCCATGTTGCGCCTCCCCTACGAAAGCCAAGAAGC 8633 || || ||| | || || || || || |||| || || |||||| | |||| Sbjct 4312 AGTTCAGGGTTTTGCAGATGCACTTATACTGATGCGTTATCCATATGAAAGCGAGCAAGC 4253 Query 8634 GCGCATGCTCAACATAAAAATAGCGGAAACGGTGTATTACGGCGCATTAGAAGCCAGCTG 8693 |||| || ||| ||||| ||||| | || || || |||||||| || ||||| Sbjct 4252 ATATTTGCTAAATATACAAATATTTGAAACAATCTACTATGGAGCATTAGAGGCAAGCTG 4193 Query 8694 TCAACTTGCCCGAGAATTGGGCACGTACGAATCGTACGCGGGCAGCCCTGCCAGCCGCGG 8753 | || | || || || || | || ||||| || | || || |||| ||| || Sbjct 4192 TGAATTAGCGGAAGTGTTCGGTCCTTATGAATCATATGAAGGGAGTCCTGTAAGCAAAGG 4133 Query 8754 AATATTGCAATACGACATGTGGAATGTCACGCCCACCTCTTTGTGGAATTGGAGCGATTT 8813 ||||| |||||||||||||||||||| ||||| || |||||| |||||| | ||| Sbjct 4132 CATATTACAATACGACATGTGGAATGTTACGCCAACAAACTTGTGGGATTGGAATGCTTT 4073 Query 8814 GAAACGCAAAATTGCTCAATTCGGTTTGCGCAATTCGCTGTTGGTGGCTTACATGCCCAC 8873 || | |||| | | || | || ||||| | | || ||| |||||| || Sbjct 4072 AAAGGAGAGAATTCAAAAGTATGGCATACGAAATTCTTTACTTGTTGCTCCCATGCCTAC 4013 Query 8874 CGCCACGACTGCTCAAATAATGGGAAACAACGAATCCTTTGAGCC 8918 || | || |||||||| | || || || ||||||||||| || Sbjct 4012 AGCATCAACAGCTCAAATTCTTGGGAATAATGAATCCTTTGAACC 3968 Score = 95.1 bits (104), Expect = 1e-14 Identities = 127/177 (72%), Gaps = 0/177 (0%) Strand=Plus/Minus Query 9142 ATGGCTGCGGATAGAGGCGCTTTTATTGATCAGAGTCAATCTTTTAACGTGTTCGTAGCC 9201 ||||| || |||||||| |||||||||||||| ||||| ||||||||| | ||| || Sbjct 3744 ATGGCAGCTGATAGAGGAGCTTTTATTGATCAAAGTCAGTCTTTTAACATTCACGTTGCA 3685 Query 9202 GCACCAACTTACGCTTTGATGTCCAGCATTCATTATTTAACTTGGAAAATGGGTTTAAAA 9261 | ||| | || | | | | ||||||| | |||||||| || | ||| Sbjct 3684 GAACCCAACTATGGAAAGTTAACATCAATTCATTTCTACGCTTGGAAATCTGGCCTTAAA 3625 Query 9262 ACAGGCATGTACTATTTGCGCACAAAACCCGCCGCTGAACCTATCAAATTTACAGTT 9318 || || ||||| ||||||||||||||||| |||||| | | || | ||||| ||| Sbjct 3624 ACTGGAATGTATTATTTGCGCACAAAACCAGCCGCTAATGCAATACAGTTTACTGTT 3568 >seq4449 Length=67262 Score = 131 bits (144), Expect = 2e-25 Identities = 164/225 (73%), Gaps = 0/225 (0%) Strand=Plus/Minus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555 || |||||||| | || | || ||||| ||||| || |||||||| | |||| | Sbjct 64498 AGACGCAACACCAAATGCAAAGTAGATTCTTTTTGGATATTGTAGTCAGAGAGGGTGCGG 64439 Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615 || || ||||||||||| ||||| ||||||||||| ||||| || || || || ||| Sbjct 64438 CCATCTTCCAGCTGTTTGCCAGCAAATATCAAACGCTGTTGATCTGGAGGAATTCCCTCT 64379 Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675 || || ||||| || |||||| || | || || || | || || || ||||| Sbjct 64378 TTGTCCTGAATCTTGGCTTTGACATTTTCGATAGTATCAGAGGGCTCAACCTCAAGAGTG 64319 Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTTGTTT 134720 |||||||| || |||| || |||||||| || ||||| |||||| Sbjct 64318 ATGGTTTTGCCCGTTAGGGTCTTAACGAAGATCTGCATGTTGTTT 64274 >seq10185 Length=35228 Score = 118 bits (130), Expect = 1e-21 Identities = 119/155 (77%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 134568 TGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATT 134627 || || || |||||||||||||| |||||||| || || || |||||||| ||||||||| Sbjct 2620 TGCTTACCAGCAAAAATCAAACGTTGCTGATCTGGTGGAATACCTTCTTTATCTTGAATT 2679 Query 134628 TTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCG 134687 || ||| || || | || || || | ||| || || | ||||| ||||| ||| Sbjct 2680 TTAGCTTTTACATTCTCGATAGTATCCGAAGGTTCTACCTCCAAGGTAATAGTTTTCCCG 2739 Query 134688 GTTAAAGTTTTAACGAAAATTTGCATTTTGTTTTT 134722 || | |||||| || || ||||||||||||||||| Sbjct 2740 GTAAGAGTTTTTACAAAGATTTGCATTTTGTTTTT 2774 >seq2705 Length=26899 Score = 89.7 bits (98), Expect = 5e-13 Identities = 106/144 (74%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 134574 CCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGT 134633 || ||| |||| ||||| |||||| |||| || || || | ||| ||||| ||||| | Sbjct 26041 CCAGCAGAAATTAAACGTTGCTGAACGGGTGGAATACCATGTTTATCTTGGATTTTAGAT 26100 Query 134634 TTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAA 134693 || || || | |||||||| | ||| || | | ||||||||||| |||| | | Sbjct 26101 TTTACATTCTCGATAGTGTCGGAAGGTTCTACCCCCAAGGTAATGGTTTTCCCGGGAAGA 26160 Query 134694 GTTTTAACGAAAATTTGCATTTTG 134717 ||||| || || |||||||||||| Sbjct 26161 GTTTTTACAAAGATTTGCATTTTG 26184 Score = 89.7 bits (98), Expect = 5e-13 Identities = 106/144 (74%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 134574 CCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGT 134633 || ||| |||| ||||| |||||| |||| || || || | ||| ||||| ||||| | Sbjct 26527 CCAGCAGAAATTAAACGTTGCTGAACGGGTGGAATACCATGTTTATCTTGGATTTTAGAT 26586 Query 134634 TTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAA 134693 || || || | |||||||| | ||| || | | ||||||||||| |||| | | Sbjct 26587 TTTACATTCTCGATAGTGTCGGAAGGTTCTACCCCCAAGGTAATGGTTTTCCCGGGAAGA 26646 Query 134694 GTTTTAACGAAAATTTGCATTTTG 134717 ||||| || || |||||||||||| Sbjct 26647 GTTTTTACAAAGATTTGCATTTTG 26670 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505010291933680