Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ephydra_20gracilis_20[genbank_20GCA_5F001014675.1_202015-05-28] 61,434 sequences; 410,872,512 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq37138 713 0.0 >seq37138 Length=11844 Score = 713 bits (790), Expect = 0.0 Identities = 1280/1849 (69%), Gaps = 28/1849 (2%) Strand=Plus/Plus Query 68395 GCGGGTTTTGTACGTAGATAGTACATACCGGTTTTCAGACCTAGACT-CCATCCGTAGAA 68453 || |||||||| || | ||| ||||| || ||||| || || ||| | ||| ||||||| Sbjct 3593 GCTGGTTTTGTGCGCAAATAATACATTCCAGTTTTAAGGCC-AGATTTCCAAGCGTAGAA 3651 Query 68454 ATGCATACTTGTTAGTTTGGAATAACTTGGATCGGCTATATGAATATTCATCGATTGACT 68513 ||| || ||||| || ||| | || || || | ||||| || | || ||||| Sbjct 3652 ATGAATTGATGTTAACTTTCCATAGTTGGGTTCTGCAACGTGAATGTTAAAAGACTGACT 3711 Query 68514 TTGATCGATGAAAGCTCCTCTATCTGCCGCCATTTTTATAATACTCTTT---TGAGGAAT 68570 |||||| || |||||||||||||| || |||||||| || | | ||| ||| ||| Sbjct 3712 TTGATCAATAAAAGCTCCTCTATCAGCTGCCATTTTAATTGT-CGATTTAACTGA--AAT 3768 Query 68571 TTCCCAAATAGTCTT--AAAAATCT-GTTTGATATCATCTGGAA--GGCTCG-TATTTTG 68624 |||||||| ||||| | || || | || | | |||| | || ||||||| Sbjct 3769 TTCCCAAACTGTCTTGTATAAGTCACGAATGGACTTA---GGAATAGTTTCTATATTTTG 3825 Query 68625 AATGGATCCACCATCGGATATAATTATATTCTTGATCTCATCATTCCACAATTTTCTCTC 68684 || || |||| ||||||||| ||| || || | |||| ||| |||| || Sbjct 3826 TATAGAACCACGGCTTGATATAATTTGATTTTTCATGTTGTCATCCCATAATTCAAGTTC 3885 Query 68685 CGTTAAAACTCTAAGGAGATGCGGATTAACTATTTGAAATTCCCCAGATAACACTCTACG 68744 |||| | |||| || || || ||||||| | ||| ||||| |||||||| || | | Sbjct 3886 GGTTAGATCTCTGAGAAGGTGATGATTAACAACTTGGAATTCACCAGATAAAACACGCCT 3945 Query 68745 AGTGTAAATATTACTGGTATATGGTTCCACAGATTCATTATTTCCCAGAATTTGAGCAGT 68804 ||||| |||||| ||||| ||||| | ||||||||||| || ||||||||||| || Sbjct 3946 GGTGTATATATTAGAAGTATAAGGTTCAAAGGATTCATTATTCCCAAGAATTTGAGCTGT 4005 Query 68805 TGATGCAGTTGGCATAGGTGCCACCAATAAACTATTTCTAAGACCATGTGTTATGATTTT 68864 |||||| || ||||| || || || | |||| ||||| | |||| || ||| | Sbjct 4006 TGATGCTGTAGGCATGGGAGCAACAAGTAAAGAATTTCGTATGCCATACTTTTGAATTCT 4065 Query 68865 ATCTTTTAGATGTTTCCAATCCCAAAGATCAGATGGTACAACATTCCAAAGATCGTATTG 68924 || |||| | ||||||||||| | | | ||| ||||||||| | |||||||| Sbjct 4066 CTCCTTTAAAGCATTCCAATCCCACAAGTTTGTTGGCGTAACATTCCACATGTCGTATTG 4125 Query 68925 TAGAATTCCGTTACTTGCATATGA-TCCATT-ATATGTTTCATAAGGTCCTTCCTGTTCA 68982 || || || || ||| || || ||| || ||||| ||||||||| || | ||| Sbjct 4126 TAATATGCCTTTGCTTACAG--GACTCCCTTCATATGATTCATAAGGACCGAACACTTCC 4183 Query 68983 GCTAGTTCACAACTTGCCTCTAATGCACCGTAATAAATTGTTTCGAAAATCTTCTTATTG 69042 |||| |||||| |||||||||||||| || || || |||||||| || || | |||| Sbjct 4184 GCTAATTCACAGCTTGCCTCTAATGCTCCATAGTAGATTGTTTCAAATATTTGTATATTT 4243 Query 69043 AGATCTTGTGCTT-CTAGACTATCGAATGGATAATGTAAAAGAATAAATGCATCTGCCAA 69101 || | ||||| || | || || |||||||| | | || |||| ||||||||| || Sbjct 4244 AGCAAATATGCTTGCTCG-CTTTCATATGGATAACGCATCAGTATAAGTGCATCTGCAAA 4302 Query 69102 TCCCTGAACCCCAATACCGATAGGTCTATGTCTCTTATTTGAACTTTCAGCTTCTGGAAT 69161 |||||||| ||||| || || |||| ||| ||| |||| || | | ||||| |||| Sbjct 4303 ACCCTGAACTCCAATTCCTATGGGTCGATGCCTCATATTAGATTTCTTGGCTTCAGGAAG 4362 Query 69162 AGGATAATAATTAATATCTATAATTTTATTAAGATTTCGGACTACTACTTTAACCACGTC 69221 |||||||||||| |||||||| |||||||| | |||| || |||| || || Sbjct 4363 AGGATAATAATTTATATCTATGATTTTATTCAAATTTTTTGTAACAGTTTTAGTTACTTC 4422 Query 69222 CTTTAGTTTGAGAAAATCAAATCGTCCAT---CTATAACAAACATATTCAGTGCTACAGA 69278 || || || |||||||| | || | || ||||| || || || | ||| Sbjct 4423 TTTAAGCTTTTGAAAATCATAAGACTTATTAGCAGAAATGAACATGTTAAGAGCAATAGA 4482 Query 69279 TGCTAGATTACAAACTGCTACCTCATTAGAATTTGCATATTGTATTATCTCTGTACATAG 69338 ||||||||| ||||| |||| ||||| | || ||||| | || || ||||| | Sbjct 4483 TGCTAGATTGCAAACGGCTATCTCATCTGGCGCTGAATATTCGACAATTTCAGTACACAA 4542 Query 69339 ATTACTACATTTGATAGTCCCCAGATTTTGCTGATTACTCTTTTTGTTACAGGCGTCCTT 69398 ||| || |||||||| || || | ||||| |||||||| ||| ||||||| | ||||| Sbjct 4543 ATTGCTGCATTTGATGGTACCAATATTTTTTTGATTACTTTTTCTGTTACAAGAATCCTT 4602 Query 69399 GTAAAGAATAAACGGAGTACCAGTTTCAATCTGAGATTCGATAATAGATTTCCAAACGAC 69458 || | ||| |||| || || ||||| | || | ||| || |||| ||||| Sbjct 4603 ATACAACATATACGGTGTTCCTGTTTCTACTTGGGCTTCAATGATAGCAAACCAAAGTGA 4662 Query 69459 CCTAGCATTTATTACGGTCTTGTAACGCTTCTCTTTTTCATATTGTGTATATAGCCGTTC 69518 | ||| || ||| | ||| |||| ||||||||||||| | ||||| | ||| Sbjct 4663 CTGAGCTTTAATTTTCCTATTGAAACGGCCTTCTTTTTCATATTTTTCATATAACTCTTC 4722 Query 69519 GAATTCATCTCCCCAAACATCATCCAATCCAGGACATTCATTTGGACACATCAATGACCA 69578 ||||| ||||||||||| ||||| | || ||||||| | |||||||| | |||||| Sbjct 4723 AAATTCTTCTCCCCAAACTTCATCAAGCCCTGGACATTTGTGGGGACACATAAGTGACCA 4782 Query 69579 CACATCATCATCCTTAACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATAAAGAG 69638 | ||||| | || ||| |||| || ||||| |||||||| || || ||| | Sbjct 4783 GTCGCCATCAGATTCTACGCGTCTCATGAACAGATCAGGAATCCAGAGGGCGTAAAATAA 4842 Query 69639 ATCTCTGGTTCTATTTTCTTCATTTCCTGTAttttttttAAGATCGAGAAACTCCATAAT 69698 ||||| | ||| | ||| || ||||||||||||||||| | || | |||||| | ||| Sbjct 4843 GTCTCTTGCTCTGTGTTCCTCTTTTCCTGTATTTTTTTTTAAGTCTAAAAACTCGAAAAT 4902 Query 69699 ATCAGAATGCCATGGTTCTAGATATATCGCCATGACTCCCGGTCGTTTATTTCCTCCCTG 69758 ||| |||||||| || |||| ||||| || | | || || | ||| || ||||| Sbjct 4903 ATCCGAATGCCAAGGCTCTAAGTATATAGCAAACGCACCAGGCCTTTTTCCGCCACCCTG 4962 Query 69759 ATCTATGTATCTGGCAGTGTTATTATAGACTCTCAGCATCGGAATAATACCATTAGATTT 69818 |||| || | || ||||| | || || | ||| || | | ||||||||| | Sbjct 4963 GTCTACATAACGTGCTACATTATTGAACACCCTTAACATAGGCACTAAGCCATTAGATGT 5022 Query 69819 ACCATTTGTTCCAGAAATATAACTTCCTCTTGCGCGAATATTACTAATAGATAGACCTAT 69878 ||||| || || | || | ||||| | || |||||| | || | || || || Sbjct 5023 GCCATTAGTGCCGCATATTGATGTTCCTTTAGCTCGAATACAATGAACATTTATTCCAAT 5082 Query 69879 TCCTCCTGCCATTTTAGAGATTAGAGCACAACGTTTCAATGTGTCATATATACCCTCTAT 69938 |||||| || |||||| || | ||||| ||| | || | | | || || || || Sbjct 5083 TCCTCCCGCTGATTTAGAAATCATTGCACACTGTTCAACTGATTTAAAAATTCCTTCAAT 5142 Query 69939 GCTATCATCTATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGTATAGTTCCCGC 69998 ||| ||| ||| |||| | |||||| || | ||| | || | ||| | || Sbjct 5143 TGAATCTGCTACCATTGTAAGCAAAAAACAAGATGATAACTGAGGGCGTCTTGTTGCAGC 5202 Query 69999 ATTAAATAATGTAGGAGATGCGTGAGTGAACCATTTTTCAGAAAGCAGATTGTATGTTTC 70058 |||||| || ||||| || || || || |||| ||||| |||| |||||||||||| Sbjct 5203 CGCAAATAAAGTTGGAGAGGCATGGGTAAAATATTTCTCAGAGAGCAAATTGTATGTTTC 5262 Query 70059 AATAGCTGATTCTATATC-CCACTGATGAATTCCTATCGCGACACGCATCAACATATGCT 70117 ||| || | || ||||| ||| ||| ||||| |||| || | ||||||||| |||| Sbjct 5263 AATTGCAGCATCGATATCTTCAC-CATGTATTCCAATCGATACTCTCATCAACATGTGCT 5321 Query 70118 GAGGTCGTTCTACCGTTTTATTATTTATTTTCAACAGGTATGATTTTTCCAGAGTTTTAA 70177 | |||| || || |||| || | ||| | || ||||| ||| ||||| |||| Sbjct 5322 GTGGTCTCTCCACAACTTTACCTTTAACTTTAAGCAAATATGAACGTTCAAGAGTCTTAA 5381 Query 70178 ACCCAAAATAGTTGTATGAAAAGTCTCTTTCGTAAATAATAACAGAATT 70226 | ||||| || |||||| |||||| | || || || || | ||||| Sbjct 5382 AGCCAAAGTAATTGTATCCAAAGTCGCGGTCATATATGATTGCCGAATT 5430 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686381305559760