Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ephydra_20gracilis_20[genbank_20GCA_5F001014675.1_202015-05-28] 61,434 sequences; 410,872,512 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq16216 113 4e-20 >seq16216 Length=13283 Score = 113 bits (124), Expect = 4e-20 Identities = 265/400 (66%), Gaps = 14/400 (4%) Strand=Plus/Plus Query 19549 TTGCACATTATAATACTAGATGAATTGGACGCAATCTGTAAGCAAAGAGGTTCTGGTGTA 19608 |||||||| || || | || ||| | || || || || |||||| | || |||| || Sbjct 6996 TTGCACATAATTATTTTCGACGAAATTGATGCCATTTGCAAGCAACGTGGCTCTGTTGCT 7055 Query 19609 ------AATGGAGTACATGACACTGTTGTCAATCAACTCCTGTCAAAATTAGACGGTGTT 19662 | || ||||| || ||||| ||||||||||| || | ||| | || |||||| Sbjct 7056 GGCAACAGCGGTGTACACGATACTGTCGTCAATCAACTGCTCGCCAAAATCGATGGTGTT 7115 Query 19663 AACCAACTGAATAATATTTTAGTTATTGGCATGACTAATAGACTGGAATTAATAGACAGC 19722 | ||| |||| || || | || ||||||||||||||| ||| || | || || Sbjct 7116 GAGCAATTGAACAACATACTCGTCATTGGCATGACTAATCGACGCGATATGATTGATGAA 7175 Query 19723 GCCTTATTACGACCCGGTCGGTTGGAAATAAAGATCGAAATTAACTTACCCGATGAATGT 19782 || || | ||||| ||||| |||||| | | || || || | ||| || |||| Sbjct 7176 GCTTTGCTGCGACCGGGTCGTTTGGAAGTGCAAATGGAGATAAGCTTGCCGAATGAGCAG 7235 Query 19783 GGACGTGTGGAAATTTTAAACATACATACATCAACCATGCGACAAAATAACCTTTTAAAT 19842 || |||||| |||| ||||| || || || | |||||| | | ||| |||| Sbjct 7236 GGGCGTGTGCAAATCTTAAATATTCACACGAAACGCATGCGCGATTACAAC----AAAAT 7291 Query 19843 GAC----GATGTAGATCTAGAAGAAATTGCAGCGGCTACCAAAAACTATAGCGGCGCAGA 19898 | ||||| || ||||| | ||||| || ||||| | || ||||| || Sbjct 7292 CGCACCGGATGTCGACTGCAAAGAATTGGCAGCATTGACGAAAAATTTCAGTGGCGCTGA 7351 Query 19899 ACTTGAGGGATTAGTGAGGGCCGCCCAATCAATTGCAATG 19938 | |||| || ||||| | || || || || | |||||| Sbjct 7352 AATTGAAGGTCTAGTGCGCGCAGCGCAGTCCACCGCAATG 7391 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397158414011170