Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ephydra_20gracilis_20[genbank_20GCA_5F001014675.1_202015-05-28] 61,434 sequences; 410,872,512 total letters Query= NC_027916.2 Length=160358 Score E Sequences producing significant alignments: (Bits) Value seq27183 86.0 6e-12 >seq27183 Length=12736 Score = 86.0 bits (94), Expect = 6e-12 Identities = 212/312 (68%), Gaps = 10/312 (3%) Strand=Plus/Plus Query 31246 aaaaGCGCATAACTCGCTATGTTGAATGGTACACCCAATCCCAAATCGGCAGATCGTTGA 31305 || ||||||||| || || ||||| || || ||||| |||| |||||| || ||| Sbjct 6383 AATAGCGCATAAGAGGCAATATTGAAGGGCACGCCCAAACCCATATCGGCGCTGCGCTGA 6442 Query 31306 TATAACAAACAGGAAAGTTCATCTCCGGTCACGTAAAATTGAAATAACACA-TGACAAGG 31364 || ||| ||| || || ||| | | ||| | ||||| ||| ||| ||||| || Sbjct 6443 TACAACTGACACGATAGCTCACCATTAGACACAAAGAATTGTGCTAA-ACAGTGACATGG 6501 Query 31365 CGGCAAAGCCATTTCACAGGTATCGACGGGATTCCAAGCGCTTACTAACAA-ACGCCGAC 31423 |||||| ||||||| |||| || |||||||||||| | ||| || || ||| Sbjct 6502 CGGCAACGCCATTTGCGGTATATCAACAGGATTCCAAGCGGACA-TAATAATGCGTCGAT 6560 Query 31424 TGGTTGGA-TCACGCTTAATCTCTTCTATCACGGCTGTT--ATTTGATCGATTCCTTCAC 31480 |||||| | || || | || ||| || ||||| | |||||||| ||||| | Sbjct 6561 CTGTTGGATTTGTGCGTATGGTGTT-TATAAC--CTGTTGCAATTGATCGACGCCTTCGC 6617 Query 31481 CCGTATAATTACTATCACATCCCTTGTAGGCTGCACCGAAATGTCGCCATTGAAACCCAT 31540 | | || | || ||| ||| || ||||| ||||| ||||| ||||| |||| Sbjct 6618 CGCTGTAGTCGTCATGGCATGTCTTATATTTGGCACCAAAATGGCGCCACTGAAAGCCAT 6677 Query 31541 AAATAGGTCCCA 31552 ||| || |||| Sbjct 6678 AAACCGGCCCCA 6689 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 512623640959520