Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ephydra_20gracilis_20[genbank_20GCA_5F001014675.1_202015-05-28] 61,434 sequences; 410,872,512 total letters Query= NC_027996.1 Length=175720 Score E Sequences producing significant alignments: (Bits) Value seq60218 185 1e-41 seq60006 154 2e-32 >seq60218 Length=1073 Score = 185 bits (204), Expect = 1e-41 Identities = 203/268 (76%), Gaps = 4/268 (1%) Strand=Plus/Plus Query 8027 TAATTTATTAATAAAAGGTGACAATTTAATTGGCTTACATTCTTTAAAAAAGAAATTTGT 8086 ||||||| | || ||||| | ||| |||||| ||||| || ||||||| | || Sbjct 121 TAATTTAATCATCAAAGGAAATAATCTAATTGCATTACACTCATTAAAAAC--ACGTTAC 178 Query 8087 GAAT--AAAGTTAAACTTATCTATATTGACCCACCTTATAATACAGGCAATACTAGTTTT 8144 | | ||||| |||||||||||||| || || || || |||||||| | ||||| Sbjct 179 GCAGGAAAAGTAAAACTTATCTATATAGATCCCCCATACAATACAGGTTCAGATGGTTTT 238 Query 8145 AATTATAACGACAAATTTAAACACACTACTTGGCTTACTTTTATGAAAAATCGCCTTGAA 8204 | ||||| || |||||||| ||| | |||||| | || || ||||||||||| |||||| Sbjct 239 CAATATAATGATAAATTTAACCACTCAACTTGGTTAACCTTCATGAAAAATCGGCTTGAA 298 Query 8205 ATTGCTAGAGAATTTTTAAGAGATGATGGTGTAATATTCGTTCAATGTGACGATAATGAA 8264 || || || || | |||| ||||||||| || || || |||||||| || |||||| Sbjct 299 ATAGCAAGGGAGCTACTAAGTCATGATGGTGCTATTTTTGTACAATGTGATGACAATGAA 358 Query 8265 CAAGCATATTTAAAAGTACTTATGGATG 8292 |||||||| ||||||||||| ||||||| Sbjct 359 CAAGCATACTTAAAAGTACTAATGGATG 386 >seq60006 Length=1004 Score = 154 bits (170), Expect = 2e-32 Identities = 220/304 (72%), Gaps = 8/304 (3%) Strand=Plus/Minus Query 8014 TTAAAAATAATCCTAATTTATTAATAAAAGGTGACAATTTAATTGGCTTACATTCTTTAA 8073 |||| ||||| ||| || |||| || || ||||| | |||| ||||||| ||| Sbjct 897 TTAACGATAATGAAAATCTAATAATTAAGGGAAACAATCTCATTGCACTACATTCAATAA 838 Query 8074 AAAAGAAATTTGTGAATAAA--GTTAAACTTATCTATATTGACCCACCTTATAATACAGG 8131 |||| ||||| | | ||| || ||| | || ||||| |||||||||||||||||||| Sbjct 837 AAAA--AATTTACGCAGAAAAAGTGAAATTAATTTATATAGACCCACCTTATAATACAGG 780 Query 8132 CAATACTAGTTTTAATTATAACGACAAATTTAAACACACTACTTGGCTTACTTTTATGAA 8191 ||| |||||||| |||||||| ||| || | | || ||||| || || ||| | Sbjct 779 AAATGACAGTTTTAAATATAACGATCGATTCAATCGATCAACATGGCTGACATTCATGGA 720 Query 8192 AAATCGCCTTGAAATTGCTAGAGAATTTTTAAGAGATGATGGTGTAATATTCGTTCAATG 8251 |||| | ||| | | |||| |||| | | |||||||| | || || ||||||| Sbjct 719 AAATAGGCTTCAGGTAGCTAAAGAAATACTTTCTGATGATGGGTTTATTTTTATTCAATG 660 Query 8252 TGACGATAATGAACAAGCATAT-TTAAAAGTACTTATG-GATGAGATATTTGGTAGAGAG 8309 ||| ||||||||| ||||||| |||||| | ||||| ||| || ||||| | |||| Sbjct 659 TGATGATAATGAATCAGCATATCTTAAAATT--TTATGCGATTCAATTTTTGGAAAAGAG 602 Query 8310 AATT 8313 |||| Sbjct 601 AATT 598 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 561744290995200