Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ephydra_20gracilis_20[genbank_20GCA_5F001014675.1_202015-05-28] 61,434 sequences; 410,872,512 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq28107 107 2e-18 >seq28107 Length=66327 Score = 107 bits (118), Expect = 2e-18 Identities = 141/193 (73%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 11623 GCCCACCGCATCAATCTCATCAATGAAGACAATACATGGTTGATTTTCGCGGGCGATTTC 11682 ||||||||||||||||||||||||||| | ||| ||||| || || ||| || ||| | Sbjct 22698 GCCCACCGCATCAATCTCATCAATGAAAAGAATGCATGGCGCATGTTTGCGTGCCATTGC 22639 Query 11683 AAAGAGATCGCGAACCCTTTTGGCACCCACACCAACAAACATCTCCACAAAGTTTGCGGC 11742 ||| | ||| || || | | | || || || |||||||| |||| ||| | || | | Sbjct 22638 AAACATATCACGGACACGTGACGGTCCAACGCCCACAAACATTTCCAAAAACTCTGAGCC 22579 Query 11743 AGAGCACTG-GATGAATGGGACATTTGATTCACCCGCGATGGCTCGGGCGAGGAGGGTCT 11801 ||| ||| | ||||| || ||||||| ||| ||||| | ||| ||||| | || | Sbjct 22578 AGA-CACGGTAATGAACGGTACATTTGCTTCTCCCGCTGTCGCTTTAGCGAGTAACGTTT 22520 Query 11802 TTCCCGTACCTGG 11814 | || || ||||| Sbjct 22519 TGCCAGTGCCTGG 22507 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 627549718526400