Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ephydra_20gracilis_20[genbank_20GCA_5F001014675.1_202015-05-28] 61,434 sequences; 410,872,512 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq48677 113 5e-20 >seq48677 Length=14681 Score = 113 bits (124), Expect = 5e-20 Identities = 208/304 (68%), Gaps = 7/304 (2%) Strand=Plus/Plus Query 158939 CAATAAACTCGCGGATGCTGTGCGTCTCTCCAGTCGCAATCACAAAGTCCTCTGGACCGG 158998 ||| ||| || || | ||| ||||| || || || || || || |||| | || | Sbjct 7328 CAACAAATTCACGCACGCTATGCGTTTCACCGGTAGCGATGACGTAGTCGGCCGGTGTAG 7387 Query 158999 GCTGTTGGAGCATGAGCCACATGGCCTCGACGTAATCCTGCGCGTGACCCCAGTCGCGCT 159058 | || ||||| |||||||||||||| |||||||| || ||||||||||| |||| Sbjct 7388 TACGCTGCAGCATCAGCCACATGGCCTCCACGTAATCTCTTGCATGACCCCAGTCACGCT 7447 Query 159059 TGGCATCCATGTTCCCGAGCTCGATGACTTTTCCAGACTTTTTCCACTCA-----GCCAG 159113 | | ||||| || || | |||| | | ||| | ||| | | || | Sbjct 7448 TTGAATCCAAATTACCCAATTCGAAG--TATTCTAATTGGTTTAAAAAAATTTTGGCAAC 7505 Query 159114 ACCGAGCGTGATCTTGCGCGTCACAAACTCTGCTCCGCGCCGTTCCGACTCATGGTTAAA 159173 | | |||| || |||||||||||||| | | || |||||| ||||| || ||||| Sbjct 7506 AGAGCGCGTAATTTTGCGCGTCACAAAGTTCTCGCCACGCCGTGGTGACTCGTGATTAAA 7565 Query 159174 CAGAATGCCGGTACAAGCGAACAGGTTATAGGACTCGCGGTAATTTTTAGTTATCCAGTA 159233 | |||||| ||||||| |||| ||| |||| ||||||||| || | ||||||| | Sbjct 7566 TAAAATGCCATTACAAGCAAACATGTTGTAGGCCTCGCGGTAGTTAACAACTATCCAGAA 7625 Query 159234 TCCA 159237 ||| Sbjct 7626 ACCA 7629 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 546795779153200